Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1081
(324 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 24 0.40
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 23 1.2
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 2.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 2.8
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 2.8
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 2.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 3.7
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 4.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 4.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 4.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 4.9
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 4.9
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 20 8.6
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 20 8.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 8.6
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 24.2 bits (50), Expect = 0.40
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -3
Query: 226 SNKKKLNLYCDLNMSGRKYTKYSKIKYNV 140
+N N Y + N + Y Y K+ YN+
Sbjct: 93 NNNYNNNNYNNYNYNNNNYNNYKKLYYNI 121
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.6 bits (46), Expect = 1.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 108 GFIS*SFFYQYTLYFILLYFVYLR 179
GF + S F + ++LYF+Y R
Sbjct: 8 GFSASSVFLSLLIPALILYFIYFR 31
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.1
Identities = 7/30 (23%), Positives = 15/30 (50%)
Frame = -3
Query: 229 VSNKKKLNLYCDLNMSGRKYTKYSKIKYNV 140
+S+ ++ + N + Y Y K+ YN+
Sbjct: 82 ISSLSNKTIHNNNNYNNNNYNNYKKLYYNI 111
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 2.8
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 229 HGWTISQTPGVKWLLEPTN 285
H T++ +W+LEPT+
Sbjct: 669 HSTTLTVNVPPRWILEPTD 687
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 2.8
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 50 YTNNTDFNLPD 18
YTN DF+ PD
Sbjct: 383 YTNEIDFSFPD 393
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.4 bits (43), Expect = 2.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 220 YCLHGWTISQTPGVKWLLEPTNIH 291
YCL G ++ + L EP IH
Sbjct: 604 YCLFGHNVTLANKFESLSEPLRIH 627
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 3.7
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = -3
Query: 250 SVRSSTRVSNKKKLNLYCDLNMSGRKYTKYSKIKYNV 140
++ ++ +N N Y + N Y Y K+ YN+
Sbjct: 322 TIHNNNNYNNNNYNNNYNNYN--NNNYNNYKKLYYNI 356
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 155 FTIFCVLTTAHI*ITI 202
FTI C+LT A +T+
Sbjct: 33 FTILCILTLALTLVTL 48
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 155 FTIFCVLTTAHI*ITI 202
FTI C+LT A +T+
Sbjct: 33 FTILCILTLALTLVTL 48
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 155 FTIFCVLTTAHI*ITI 202
FTI C+LT A +T+
Sbjct: 33 FTILCILTLALTLVTL 48
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 155 FTIFCVLTTAHI*ITI 202
FTI C+LT A +T+
Sbjct: 33 FTILCILTLALTLVTL 48
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 253 VSVRSSTRVSNKKKLN 206
+ S T VSN KKL+
Sbjct: 565 IKANSQTEVSNSKKLD 580
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 19.8 bits (39), Expect = 8.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 65 VIIFIYTNNTDFNLPD 18
+IIFIY+N T + D
Sbjct: 17 LIIFIYSNETIAQVTD 32
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 19.8 bits (39), Expect = 8.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 65 VIIFIYTNNTDFNLPD 18
+IIFIY+N T + D
Sbjct: 17 LIIFIYSNETIAQVTD 32
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 19.8 bits (39), Expect = 8.6
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +1
Query: 283 NIHNVYAPPT 312
++HN+YA PT
Sbjct: 1472 DLHNLYAVPT 1481
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,420
Number of Sequences: 438
Number of extensions: 2194
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7093251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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