Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1081
         (324 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g46640.1 68415.m05818 hypothetical protein  and genefinder; e...    28   1.6  
At4g39840.1 68417.m05645 expressed protein                             27   3.8  
At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma mem...    26   5.0  
At4g30430.1 68417.m04322 senescence-associated family protein si...    26   6.7  
At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma m...    25   8.8  
At2g34410.1 68415.m04217 O-acetyltransferase family protein simi...    25   8.8  

>At2g46640.1 68415.m05818 hypothetical protein  and genefinder;
           expression supported by MPSS
          Length = 310

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +2

Query: 119 LIFFLPV-HIIFYFTIFCVLTTAHI 190
           L+ F+PV HI+FY+ + C L   +I
Sbjct: 282 LLVFVPVMHIVFYYYVICFLIYTYI 306


>At4g39840.1 68417.m05645 expressed protein
          Length = 451

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
 Frame = +2

Query: 77  ISIIFLNNRYWIYF----LIFFLPVHIIFYFTIFCV 172
           +S+IF  NR+  YF    ++ F+ +++  YF+I C+
Sbjct: 290 VSLIF--NRFKAYFSLQKILIFIQIYLSIYFSILCL 323


>At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma
           membrane-type, putative / Ca2+-ATPase, putative (ACA11)
           identical to SP|Q9M2L4|ACAB_ARATH Potential
           calcium-transporting ATPase 11, plasma membrane-type (EC
           3.6.3.8) (Ca(2+)-ATPase isoform 11) {Arabidopsis
           thaliana}; strong similarity to calmodulin-stimulated
           calcium-ATPase [Brassica oleracea] GI:1805654
          Length = 1025

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 305 GAYTLWMFVGSSNHLTPGVCEIVHPCK 225
           G YTL   VG  + + PGV E V  C+
Sbjct: 636 GGYTLVAVVGIKDPVRPGVREAVQTCQ 662


>At4g30430.1 68417.m04322 senescence-associated family protein
           similar to senescence-associated protein 5 [Hemerocallis
           hybrid cultivar] gi|3551954|gb|AAC34855
          Length = 272

 Score = 25.8 bits (54), Expect = 6.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 107 WIYFLIFFLPVHIIFYFTIFCVLTTA 184
           W Y  + F  + I+  FTIF  + T+
Sbjct: 73  WSYLFVMFFLILIVLCFTIFAFVVTS 98


>At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma
           membrane-type / Ca2+-ATPase, isoform 4 (ACA4) identical
           to SP|O22218 Calcium-transporting ATPase 4, plasma
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4)
           {Arabidopsis thaliana}
          Length = 1030

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 305 GAYTLWMFVGSSNHLTPGVCEIVHPCK 225
           G YT+   VG  + + PGV E V  C+
Sbjct: 639 GGYTMVAVVGIKDPVRPGVREAVQTCQ 665


>At2g34410.1 68415.m04217 O-acetyltransferase family protein similar
           to O-acetyltransferase (GI:17016934) [Homo sapiens];
           contains 11 transmembrane domains
          Length = 540

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 71  IHISIIFLNNRYWIYFLIFFLPVHIIFYFTIFCVL 175
           +  S I LNN Y +Y++    P+H +F   ++  L
Sbjct: 243 VAFSCIILNNDYMLYYI---CPMHTLFTLMVYGAL 274


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,070,204
Number of Sequences: 28952
Number of extensions: 129825
Number of successful extensions: 271
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 360538848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)