Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1077
         (435 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    24   0.54 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.7  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    22   2.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   2.2  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   3.8  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   5.1  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   6.7  

>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 24.2 bits (50), Expect = 0.54
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 255 KLQKSNISVSHRYNLHH 305
           KL KS I+  H Y+LHH
Sbjct: 97  KLPKSTITHLHIYDLHH 113


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 216 RSIKRDRI*FCPCKLQKSNISVSHRYNLHH 305
           R +  D +     KL K++I   H Y+LHH
Sbjct: 383 RKLGEDLVTHSGHKLAKASIVNLHIYDLHH 412


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 258 LQKSNISVSHRYNLHH 305
           + K  I++ H Y+LHH
Sbjct: 81  IPKDTITIIHIYDLHH 96


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 216 RSIKRDRI*FCPCKLQKSNISVSHRYNLHH 305
           R +  D +     KL K +I   H Y+LHH
Sbjct: 383 RKLGEDLVTHSGHKLAKGSIVNLHIYDLHH 412


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 216 RSIKRDRI*FCPCKLQKSNISVSHRYNLHH 305
           RS+  D + +   KL+  ++   H Y++HH
Sbjct: 66  RSLGEDIVTYSGHKLKAGSMVHLHIYDMHH 95


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 216 RSIKRDRI*FCPCKLQKSNISVSHRYNLHH 305
           R +  D +     KL+K  I   H Y+LH+
Sbjct: 67  RELGEDMVTTTGYKLRKGTILQLHIYDLHY 96


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 68  SNGEARKQGLDGTRCASVGYLCVTLRSNQRI 160
           +NG+   + +D T C  + Y  V L  + RI
Sbjct: 35  NNGKFTVEDIDPTLCTHLIYSFVGLGDDSRI 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,697
Number of Sequences: 336
Number of extensions: 1946
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)