BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1077
(435 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041125-1|AAH41125.1| 787|Homo sapiens KIAA1586 protein. 29 9.1
AL450489-1|CAH71219.1| 787|Homo sapiens protein ( Human DNA seq... 29 9.1
>BC041125-1|AAH41125.1| 787|Homo sapiens KIAA1586 protein.
Length = 787
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 102 PSRPCFRASPLLCYDDNGLTAYNANMIFVK 13
PSRP L+C DD +AY ++++F K
Sbjct: 38 PSRPVLEYIDLVCGDDENPSAYYSDILFPK 67
>AL450489-1|CAH71219.1| 787|Homo sapiens protein ( Human DNA
sequence from clone RP11-203B9 on chromosome 6 Contains
the 3 'end of gene FLJ30162, a novel gene, the 5'end of
gene ).
Length = 787
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 102 PSRPCFRASPLLCYDDNGLTAYNANMIFVK 13
PSRP L+C DD +AY ++++F K
Sbjct: 38 PSRPVLEYIDLVCGDDENPSAYYSDILFPK 67
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,028,349
Number of Sequences: 237096
Number of extensions: 975944
Number of successful extensions: 2865
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2865
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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