Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1077
         (435 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   4.5  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   4.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   4.5  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   6.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   6.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   7.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 86  KQGLDGTRCASVGYLCVTLR 145
           ++G DG R  ++ Y+C  +R
Sbjct: 214 RRGFDGFRVDALPYICEDMR 233


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 211 FKGALNGTEFNFVLASYRSQIFLSVTGITYTI 306
           F G  +G  FN V+    ++IFL   G+   I
Sbjct: 70  FNGYDDGGNFNEVVIREIAEIFLDENGVNKLI 101


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 86  KQGLDGTRCASVGYLCVTLR 145
           ++G DG R  ++ Y+C  +R
Sbjct: 214 RRGFDGFRVDALPYICEDMR 233


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 427 IIIGPFLLAWL 395
           II+G F+L WL
Sbjct: 13  IIVGGFILCWL 23


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 427 IIIGPFLLAWL 395
           II+G F+L WL
Sbjct: 461 IIVGGFILCWL 471


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 172 CRFRNPLIRPQCNTKVADGRTPRS 101
           C F   L +P C+ + + G   RS
Sbjct: 3   CPFSRDLSKPGCDEQTSRGDNDRS 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,006
Number of Sequences: 438
Number of extensions: 2039
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)