Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1076
         (496 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.28 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    25   0.37 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    25   0.37 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.37 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   1.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   2.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   6.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   6.1  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.1  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   8.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +1

Query: 145  RVVLSEFVYVTSIYTLY---KKITLVSNLFPPFFIYSNFLLALLANKHSVHL 291
            R+V++ +VY  +I+T+         + N+   F  Y   L+  + ++H V L
Sbjct: 1210 RMVVARYVYYATIFTIITATSSFVTIHNVIGQFLGYFIGLITFVMSQHCVEL 1261


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +1

Query: 88  LKIINNWYIELQ*CGEPVIRVVLSEFVYVTSIYTLYKKITLVSNLFP-PFFIYSNFLLAL 264
           LKI+   Y +L+ C     R ++S  V    IY+L + + + +++F  PF +   F  +L
Sbjct: 154 LKILLGKYTQLKACLMEEKRPMVSLQVIKAQIYSLRETVDVFNDIFGWPFLLLITF-TSL 212

Query: 265 LANKHSVHLTVSGYPT 312
               +  H+ V   P+
Sbjct: 213 QIMVYLQHIFVKSRPS 228


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +1

Query: 88  LKIINNWYIELQ*CGEPVIRVVLSEFVYVTSIYTLYKKITLVSNLFP-PFFIYSNFLLAL 264
           LKI+   Y +L+ C     R ++S  V    IY+L + + + +++F  PF +   F  +L
Sbjct: 154 LKILLGKYTQLKACLMEEKRPMVSLQVIKAQIYSLRETVDVFNDIFGWPFLLLITF-TSL 212

Query: 265 LANKHSVHLTVSGYPT 312
               +  H+ V   P+
Sbjct: 213 QIMVYLQHIFVKSRPS 228


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +1

Query: 88  LKIINNWYIELQ*CGEPVIRVVLSEFVYVTSIYTLYKKITLVSNLFP-PFFIYSNFLLAL 264
           LKI+   Y +L+ C     R ++S  V    IY+L + + + +++F  PF +   F  +L
Sbjct: 474 LKILLGKYTQLKACLMEEKRPMVSLQVIKAQIYSLRETVDVFNDIFGWPFLLLITF-TSL 532

Query: 265 LANKHSVHLTVSGYPT 312
               +  H+ V   P+
Sbjct: 533 QIMVYLQHIFVKSRPS 548



 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 139 VIRVVLSEFVYVTSIYTLYKKIT 207
           V+++ L   +YV +IYT+   +T
Sbjct: 66  VVQITLDATLYVQNIYTVLTALT 88


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 365 FQFYFCLFLCI 397
           FQFY+  FLC+
Sbjct: 154 FQFYYTYFLCV 164


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 139 VIRVVLSEFVYVTSIYTLYKKIT 207
           V+++ L   +YV +IYT+   +T
Sbjct: 66  VVQITLDATLYVQNIYTVLTALT 88


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 437 APPFGTKKRPFYFKYTKIDKNK 372
           APP   + +P  F YT   KN+
Sbjct: 222 APPQWYQHQPLLFTYTDDGKNQ 243


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 280 SVHLTVSGYPTN*AWVKRSALTSFCNP*ISVL 375
           S+H +++GYP      +R   T+F    + VL
Sbjct: 53  SLHSSMAGYPAGNQRKQRRERTTFTRAQLDVL 84


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 40  FH*QCHQHRSPP 5
           +H Q H H  PP
Sbjct: 85  YHPQLHSHHGPP 96


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 40  FH*QCHQHRSPP 5
           +H Q H H  PP
Sbjct: 85  YHPQLHSHHGPP 96


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = -3

Query: 131  PHHCNSIYQLLI 96
            PH+CN+ Y+ ++
Sbjct: 1112 PHNCNAYYRCVL 1123


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 40  FH*QCHQHRSPP 5
           +H Q H H  PP
Sbjct: 85  YHPQLHSHHGPP 96


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 40  FH*QCHQHRSPP 5
           +H Q H H  PP
Sbjct: 85  YHPQLHSHHGPP 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,525
Number of Sequences: 336
Number of extensions: 2824
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)