Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1075
(422 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 1.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 1.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 1.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 1.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 1.6
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 23 1.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 1.6
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 2.1
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 2.1
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 21 4.9
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 6.5
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 20 8.6
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 20 8.6
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 1.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 181 LSRRSFLPYHTFPYRLPFQ 237
++ + +PYH PY P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 1.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 181 LSRRSFLPYHTFPYRLPFQ 237
++ + +PYH PY P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 1.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 181 LSRRSFLPYHTFPYRLPFQ 237
++ + +PYH PY P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 1.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 181 LSRRSFLPYHTFPYRLPFQ 237
++ + +PYH PY P+Q
Sbjct: 237 MASMNIVPYHMSPYGHPYQ 255
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 1.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 181 LSRRSFLPYHTFPYRLPFQ 237
++ + +PYH PY P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 22.6 bits (46), Expect = 1.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 181 LSRRSFLPYHTFPYRLPFQ 237
++ + +PYH PY P+Q
Sbjct: 69 MASMNIVPYHMSPYGHPYQ 87
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 1.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 181 LSRRSFLPYHTFPYRLPFQ 237
++ + +PYH PY P+Q
Sbjct: 281 MASMNIVPYHMSPYGHPYQ 299
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 22.2 bits (45), Expect = 2.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 91 QGSTSTMFGRPTR*RSVPLASHNYGP 168
QGS+S+ G P + +VP S + GP
Sbjct: 1095 QGSSSSSEGVPLKGTAVPPPSGSSGP 1120
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 22.2 bits (45), Expect = 2.1
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +1
Query: 325 WSPALTISKVLLSICSLLCDPNPDDPLV 408
WSPA T + P P DP V
Sbjct: 108 WSPAATAAATATEYKYSAAAPGPSDPSV 135
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 21.0 bits (42), Expect = 4.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +3
Query: 168 QLTVLIKEEFSSLPYISLQTTLSNHQKLHHNTYL 269
QL L+K E + + + L +L L H T +
Sbjct: 151 QLDALVKVEMTRVSLLQLIKSLRQSSSLEHCTLI 184
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 20.6 bits (41), Expect = 6.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 217 PYRLPFQTTKSCITTRIYHPNIN 285
PY++ Q T S +IY P N
Sbjct: 333 PYQISAQPTPSQSPNQIYQPVTN 355
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 20.2 bits (40), Expect = 8.6
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 422 FFFFGTKGSSGLGSHRSEQIES 357
+F + KG+SGL H + E+
Sbjct: 412 WFMWKAKGTSGLEKHVDKVFEN 433
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 20.2 bits (40), Expect = 8.6
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 274 PNINSNGSICLDILRAQWS 330
PN S C D L + WS
Sbjct: 24 PNATLQSSACTDDLSSCWS 42
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,899
Number of Sequences: 336
Number of extensions: 2920
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 9384961
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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