Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1075
(422 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 106 9e-24
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 106 9e-24
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 83 9e-17
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 75 2e-14
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 72 2e-13
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 62 2e-10
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 7e-09
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 4e-08
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 5e-07
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 48 4e-06
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 47 6e-06
SB_47222| Best HMM Match : UQ_con (HMM E-Value=5) 47 7e-06
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 44 7e-05
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 40 8e-04
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 40 8e-04
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 40 8e-04
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 38 0.003
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.098
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 33 0.13
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 30 0.91
SB_26293| Best HMM Match : WD40 (HMM E-Value=1.1e-15) 29 1.6
SB_43290| Best HMM Match : AMP-binding (HMM E-Value=6.5e-16) 29 2.1
SB_11967| Best HMM Match : Pollen_allerg_2 (HMM E-Value=1.7) 28 2.8
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_33210| Best HMM Match : Spectrin (HMM E-Value=1.3e-12) 28 3.7
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_292| Best HMM Match : HEAT (HMM E-Value=4.6e-29) 28 3.7
SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0) 27 6.4
SB_9755| Best HMM Match : Sushi (HMM E-Value=0) 27 6.4
SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_59018| Best HMM Match : Calx-beta (HMM E-Value=2.2) 27 8.5
SB_45042| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_1836| Best HMM Match : zf-C2H2 (HMM E-Value=0.0016) 27 8.5
SB_57341| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 106 bits (254), Expect = 9e-24
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = +2
Query: 41 NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFP 220
N A KRI REL ++ DPP CSAGP G+DL+ W +TI+GP S Y+GGVFFL IHFP
Sbjct: 132 NQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFP 191
Query: 221 TDYPFKPPK 247
+DYPFKPPK
Sbjct: 192 SDYPFKPPK 200
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 106 bits (254), Expect = 9e-24
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = +2
Query: 41 NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFP 220
N A KRI REL ++ DPP CSAGP G+DL+ W +TI+GP S Y+GGVFFL IHFP
Sbjct: 92 NQSTAAKRIQRELTEITLDPPPNCSAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFP 151
Query: 221 TDYPFKPPK 247
+DYPFKPPK
Sbjct: 152 SDYPFKPPK 160
Score = 67.7 bits (158), Expect = 4e-12
Identities = 31/39 (79%), Positives = 33/39 (84%)
Frame = +1
Query: 292 GSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLV 408
G +CLDIL+ WSPALTISKVLLSICSLL D NP DPLV
Sbjct: 161 GMVCLDILKDSWSPALTISKVLLSICSLLTDCNPADPLV 199
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 83.0 bits (196), Expect = 9e-17
Identities = 44/88 (50%), Positives = 54/88 (61%)
Frame = +2
Query: 113 SAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVASQHVFIILT*TVM 292
SAGP G+ L+ W +TI+GP S Y+GGVFFL IHFPTDYPFKPPKV Q + + L T
Sbjct: 43 SAGPKGDKLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV-GQAIRLSLYTTES 101
Query: 293 VPSVLTFCVHSGHQRSPYPKCCSQSAHF 376
PS + HQR Y + +A F
Sbjct: 102 TPSYQ--IIPLNHQRF-YARVTDVNAFF 126
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 75.4 bits (177), Expect = 2e-14
Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Frame = +1
Query: 217 PYRLPFQTTKSCITTRIYHPNINSNGSICLDIL----RAQWSPALTISKVLLSICSLLCD 384
P R PF+ K T IYHPNI+S+G ICLD L + W PAL IS VL +I L+ +
Sbjct: 22 PERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILMAE 81
Query: 385 PNPDDPLV 408
PNPDDPL+
Sbjct: 82 PNPDDPLM 89
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 158 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
++G +PY G+F L I P YPF+PPKV
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKV 32
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 71.7 bits (168), Expect = 2e-13
Identities = 34/64 (53%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Frame = +1
Query: 229 PFQTTKSCITTRIYHPNINSNGSICLDILR----AQWSPALTISKVLLSICSLLCDPNPD 396
PF+ K T IYHPNI+S+G ICLD L+ W PAL IS VL +I L+ +PNPD
Sbjct: 40 PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILMAEPNPD 99
Query: 397 DPLV 408
DPL+
Sbjct: 100 DPLM 103
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 62.1 bits (144), Expect = 2e-10
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 214 FPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQ-WSPALTISKVLLSICSLLCDPN 390
FP PF+ K T+IYHPNI+ G +CL I+ + W PA +V+ ++ +L+ DP
Sbjct: 48 FPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPIISPENWKPATKTEQVIQALLALVHDPE 107
Query: 391 PDDPL 405
P+ PL
Sbjct: 108 PEHPL 112
Score = 44.4 bits (100), Expect = 4e-05
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 134 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
++ +WQ I+ P PY G F + I FP +YPFKPPK+
Sbjct: 22 NILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKI 59
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 56.8 bits (131), Expect = 7e-09
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +1
Query: 259 TRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPL 405
T+I+HPN+ NG IC++ L+ W P L I +VLL++ LL PNP+ L
Sbjct: 149 TKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESAL 197
Score = 31.5 bits (68), Expect = 0.30
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 44 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGP 169
S +K++ RE+ L DPP + ED+ QA+I GP
Sbjct: 103 SPQIIKQVAREIHGLTNDPPEGIKVFSNDEDITDIQASIEGP 144
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 54.4 bits (125), Expect = 4e-08
Identities = 29/79 (36%), Positives = 43/79 (54%)
Frame = +2
Query: 14 VESQYNST*NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGG 193
+E QYN A+KR+ RE ++L R+ A P ++LF W T+ GP D+ + GG
Sbjct: 1 MEKQYNLR---SPAVKRLMREAKEL-RNATELYHAQPLEDNLFEWHFTVRGPPDTEFAGG 56
Query: 194 VFFLTIHFPTDYPFKPPKV 250
+ I P +YP KPP +
Sbjct: 57 RYHGRIILPPEYPMKPPSI 75
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 50.8 bits (116), Expect = 5e-07
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +2
Query: 122 PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
P +D+ A I GP D+PY+GG F+ I P DYP +PP+V
Sbjct: 5 PDKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRV 47
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 47.6 bits (108), Expect = 4e-06
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 13/94 (13%)
Frame = +1
Query: 160 YGPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILR------- 318
+GP + F + +FP+ P+ T+++HPNI +G +C+ IL
Sbjct: 1162 FGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYESGDVCISILHPPVDDPQ 1221
Query: 319 ------AQWSPALTISKVLLSICSLLCDPNPDDP 402
+W+P + +LLS+ SLL +PN P
Sbjct: 1222 SGELPSERWNPTQNVRTILLSVISLLNEPNTFSP 1255
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 53 ALKRINRELQDLGRDPPAQCSAG-PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 229
A++ + EL+ L +P + P + F W I GP + Y GG F + FP DY
Sbjct: 1125 AVRALQLELKKLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDY 1184
Query: 230 PFKPP 244
P+ PP
Sbjct: 1185 PYSPP 1189
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 47.2 bits (107), Expect = 6e-06
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2
Query: 131 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVASQHVFIILT*TV 289
++LF W T+ GP D+ + GG + I P +YP KPP + V++ T TV
Sbjct: 1 DNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLTVWLYYTSTV 53
>SB_47222| Best HMM Match : UQ_con (HMM E-Value=5)
Length = 46
Score = 46.8 bits (106), Expect = 7e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 355 LLSICSLLCDPNPDDPLVP 411
LLSICSLLCDPNPDDPLVP
Sbjct: 2 LLSICSLLCDPNPDDPLVP 20
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 13/76 (17%)
Frame = +1
Query: 214 FPYRLPFQTTKSCITTRIYHPNINSNGSICLDILR-------------AQWSPALTISKV 354
FP P + + I+HPN++ NG +C+ IL +W P T+ +
Sbjct: 388 FPKEYPQRPPTLTFISDIWHPNVHKNGEVCISILHEPGEDKYGYEKADERWRPIHTVETI 447
Query: 355 LLSICSLLCDPNPDDP 402
+LS+ S+L +PN + P
Sbjct: 448 MLSVISMLAEPNDESP 463
Score = 43.2 bits (97), Expect = 9e-05
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 83 DLGRDPPAQCSAGPHG-EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPP 244
+L + P SAG EDL+ W+ ++GP + Y+ G F ++ FP +YP +PP
Sbjct: 343 ELQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPP 397
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 43.6 bits (98), Expect = 7e-05
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1
Query: 322 QWSPALTISKVLLSICSLLCDPNPDDPL 405
+WSPAL I VLLSI +LL PNPDDPL
Sbjct: 2 KWSPALQIRTVLLSIQALLSAPNPDDPL 29
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 41.5 bits (93), Expect = 3e-04
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 164 GPVDSPYQGGVFFLTIHFPTDYPFKPPKVAS 256
GPV +PY+GGV+ + + P YPFK P +A+
Sbjct: 56 GPVGTPYEGGVWKVRVDLPEKYPFKSPSIAN 86
>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
Length = 55
Score = 39.9 bits (89), Expect = 8e-04
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 149 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
+A + GPVD+PY G F I FP YP PP V
Sbjct: 9 RALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLV 42
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 39.9 bits (89), Expect = 8e-04
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 250 CITTRIYHPNIN-SNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVP 411
C+ IYHPN++ +GS+CL +L W+ + + ++ + L +PN +DPL P
Sbjct: 73 CVNN-IYHPNMDLDDGSVCLSLLD-DWNESNDLEDLVQGLLFLFYNPNLEDPLSP 125
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 39.9 bits (89), Expect = 8e-04
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 158 IMGPVDSPYQGGVFFLTIHFPTDYPFKPPK 247
I GP ++P++GG + L I P YPF PPK
Sbjct: 693 IRGPPETPFEGGTYNLDIVIPETYPFNPPK 722
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 37.9 bits (84), Expect = 0.003
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 259 TRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPL 405
T+IYHPN++ +C+ +L W + + ++ + L +PN +DPL
Sbjct: 75 TKIYHPNMDGYDGVCMSLL-DDWQASNDLEDLVQGLLFLFYNPNLEDPL 122
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 33.1 bits (72), Expect = 0.098
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Frame = +2
Query: 59 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQA---TIMGPV----DSPYQGGVF-FLTIH 214
KR+ +E QD+ R SA ++LF W TI G D G F L I
Sbjct: 737 KRLMKEFQDVSRKTERIFSAELVDDNLFEWNVKLHTIDGDSLLYRDMVETGSKFILLNIT 796
Query: 215 FPTDYPFKPP 244
FP ++PF PP
Sbjct: 797 FPENFPFAPP 806
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 32.7 bits (71), Expect = 0.13
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 146 WQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPP 244
++ I GP +PY G+F I P +YP PP
Sbjct: 636 FRVMIEGPAGTPYDHGLFAFDILLPANYPDAPP 668
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 29.9 bits (64), Expect = 0.91
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 406 PKGRLGWDRIEVSRLRATLWIW*ALVTTVHAECQDRW 296
P RL W+R+E+SR+ LW W V + Q W
Sbjct: 166 PLFRLHWNRVEMSRVMVFLW-WIKFALRVSMQKQINW 201
>SB_26293| Best HMM Match : WD40 (HMM E-Value=1.1e-15)
Length = 140
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 202 EENSSLIRTVNWAHNCGLPMEQIFTV-WACRTLCW 101
E +S +R V WA N GLP I + CR + W
Sbjct: 35 EAHSDWVRDVAWAPNVGLPTSTIASCSQDCRVIIW 69
>SB_43290| Best HMM Match : AMP-binding (HMM E-Value=6.5e-16)
Length = 980
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 131 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYP 232
E+ F W + ++ VDS + GGV+ L + P P
Sbjct: 186 EESFQWMSHVLPAVDSIHSGGVYCLCLVPPGGLP 219
>SB_11967| Best HMM Match : Pollen_allerg_2 (HMM E-Value=1.7)
Length = 1815
Score = 28.3 bits (60), Expect = 2.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 367 CSLLCDPNPDDPLVPKK 417
C + DPNP DP +P K
Sbjct: 1311 CGTITDPNPKDPYIPDK 1327
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -3
Query: 180 GLSTGPIIVACQWNRSS-PCGPAEHCAGGSLPRSCNS 73
GL + A WN S C P A GSL +CNS
Sbjct: 803 GLRCDQCVSAYYWNPSGYGCSPCNCDASGSLATNCNS 839
>SB_33210| Best HMM Match : Spectrin (HMM E-Value=1.3e-12)
Length = 186
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 96 IHQHNVRQAHTVKICSIGKPQLWAQLTVLIKE 191
+H+ N + +++C QLW L VLIK+
Sbjct: 56 LHRENYHDSERIQVCKGRIIQLWELLLVLIKQ 87
>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2578
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 250 CITTRIYHPNINSNGSICLDILRAQWSPALTISK 351
CI T + ++ N S LD+ +AQ+ AL+ K
Sbjct: 2081 CIATEALNNHLRCNDSFVLDLFQAQYRSALSCPK 2114
>SB_292| Best HMM Match : HEAT (HMM E-Value=4.6e-29)
Length = 1239
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 328 SPALTISKVLLSICSLLCDPN 390
S +LTISK + IC LL DPN
Sbjct: 116 SSSLTISKFVPHICKLLGDPN 136
>SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0)
Length = 446
Score = 27.1 bits (57), Expect = 6.4
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 322 QWSPALTISKVLLSICSLL 378
+WSP ++ K+LLS+ S+L
Sbjct: 9 RWSPVQSVEKILLSVISML 27
>SB_9755| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1351
Score = 27.1 bits (57), Expect = 6.4
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 312 NVKTDGTITVYVRMINTCCDATFGGLKG*SVGKCMVRKK 196
N DG++T Y I CD F L+G SV +C ++
Sbjct: 349 NGSKDGSLTFYPNKITFACDEGF-LLRGSSVRRCQSNRR 386
>SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.1 bits (57), Expect = 6.4
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 403 KGRLGWDRIEVSRLRATLWIW*ALVTTVHAECQDRWNH 290
+GRL D S R T W+ +T + C DRW H
Sbjct: 57 RGRLHSDEPSDSGERNTYWM--KQLTEFESSCTDRWGH 92
>SB_59018| Best HMM Match : Calx-beta (HMM E-Value=2.2)
Length = 291
Score = 26.6 bits (56), Expect = 8.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 190 RSFLPYHTFPYRLPFQTTKSCITTRI 267
R F+P F +P+ T SC T I
Sbjct: 13 RDFIPLSNFTVTIPYGTNTSCFTVTI 38
>SB_45042| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 26.6 bits (56), Expect = 8.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 325 WSPALTISKVLLSICSLLCDPNPDDPLVPK 414
W P + +S VLL++ L D D PK
Sbjct: 244 WEPYMDVSSVLLALLELSADDKAHDMSFPK 273
>SB_1836| Best HMM Match : zf-C2H2 (HMM E-Value=0.0016)
Length = 413
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 244 KSCITTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLC 381
K + I + N + N I I++ + LTI KV + I +LLC
Sbjct: 355 KGMLPKFINNGNADGNVRISSVIMKEMYHELLTIVKVFIGIYALLC 400
>SB_57341| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 26.6 bits (56), Expect = 8.5
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 216 SLQTTLSNHQKLHHNTYLS-S*HKQ*WFHLS*HSACTVVTSAHHIQSVALNL 368
SL TL + +K HH T LS + H+Q HL+ S HH+ S+++ L
Sbjct: 84 SLSVTL-HREKQHHLTSLSVTLHRQKQDHLTSLSVTLHREKQHHLTSLSVTL 134
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,548,482
Number of Sequences: 59808
Number of extensions: 367468
Number of successful extensions: 941
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 801830705
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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