Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1075
         (422 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   1.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   4.3  
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    21   7.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    20   10.0 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    20   10.0 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    20   10.0 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    20   10.0 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   10.0 

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 196 FLPYHTFPYRLPFQTTKSCITTRIY 270
           +L + T P RL F    +C T  +Y
Sbjct: 141 YLLFATLPLRLSFCVVLACSTATVY 165


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 360 LNLLTSMRSQPRRPFGAKE 416
           LNL T++ SQP   FG  +
Sbjct: 370 LNLSTALMSQPPPNFGVSQ 388


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 181 LSRRSFLPYHTFPYRLPF 234
           ++  + +PYH  PY  P+
Sbjct: 69  MASMNIVPYHMSPYGHPY 86


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 126 CGPAEHCAGGSLP 88
           CGP E   G +LP
Sbjct: 20  CGPPEEETGSNLP 32


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 126 CGPAEHCAGGSLP 88
           CGP E   G +LP
Sbjct: 20  CGPPEEETGSNLP 32


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 315 ACTVVTSAHHIQSVALNLLTSM 380
           AC  VTSA H +  + NL  SM
Sbjct: 14  ACQDVTSAIHQRKSSKNLEHSM 35


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 126 CGPAEHCAGGSLP 88
           CGP E   G +LP
Sbjct: 20  CGPPEEETGSNLP 32


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 271 HPNINSNGSIC 303
           H NI SNG IC
Sbjct: 370 HDNICSNGWIC 380


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,439
Number of Sequences: 438
Number of extensions: 3063
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)