Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1075
(422 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 124 3e-29
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 124 3e-29
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 122 8e-29
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 122 1e-28
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 122 1e-28
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 121 2e-28
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 121 2e-28
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 121 2e-28
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 120 5e-28
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 120 5e-28
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 118 2e-27
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 117 3e-27
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 116 7e-27
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 109 1e-24
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 102 9e-23
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 89 2e-18
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 78 3e-15
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 78 3e-15
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 78 3e-15
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 74 3e-14
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 74 3e-14
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 72 2e-13
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 72 2e-13
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 72 2e-13
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 69 1e-12
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 66 7e-12
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 63 7e-11
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 63 9e-11
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 63 9e-11
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 63 9e-11
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 61 3e-10
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 59 1e-09
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 58 2e-09
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 57 4e-09
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 56 7e-09
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 56 1e-08
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 56 1e-08
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 55 2e-08
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 55 2e-08
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 54 4e-08
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 54 5e-08
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 53 9e-08
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 53 9e-08
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 52 2e-07
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 50 5e-07
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 47 5e-06
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 43 7e-05
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 43 1e-04
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 42 2e-04
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 39 0.002
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 38 0.002
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 38 0.002
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 38 0.002
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 38 0.004
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 34 0.046
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 34 0.046
At1g23760.1 68414.m02998 BURP domain-containing protein / polyga... 32 0.18
At3g17180.1 68416.m02191 serine carboxypeptidase S10 family prot... 30 0.74
At1g09790.1 68414.m01098 phytochelatin synthetase-related contai... 29 0.98
At4g08150.1 68417.m01346 homeobox protein knotted-1 like 1 (KNAT... 29 1.7
At4g19330.1 68417.m02848 kelch repeat-containing F-box family pr... 28 2.3
At4g19250.1 68417.m02839 kelch repeat-containing protein contain... 28 2.3
At1g70370.1 68414.m08095 BURP domain-containing protein / polyga... 28 2.3
At4g23790.1 68417.m03421 expressed protein many other Arabidopsi... 28 3.0
At3g53590.1 68416.m05919 leucine-rich repeat transmembrane prote... 27 6.9
At2g06850.1 68415.m00767 xyloglucan:xyloglucosyl transferase / x... 27 6.9
At5g03905.1 68418.m00370 hesB-like domain-containing protein low... 26 9.1
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 124 bits (298), Expect = 3e-29
Identities = 52/68 (76%), Positives = 58/68 (85%)
Frame = +2
Query: 50 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 229
MA KRIN+EL+DL RDPP CSAGP G+D+F WQATIMGP DSP+ GGVF +TIHFP DY
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 230 PFKPPKVA 253
PFKPPKVA
Sbjct: 61 PFKPPKVA 68
Score = 116 bits (279), Expect = 7e-27
Identities = 54/84 (64%), Positives = 62/84 (73%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALT 342
GP+ + FL FP PF+ K T++YHPNINSNGSICLDIL+ QWSPALT
Sbjct: 39 GPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALT 98
Query: 343 ISKVLLSICSLLCDPNPDDPLVPK 414
+SKVLLSICSLL DPNPDDPLVP+
Sbjct: 99 VSKVLLSICSLLTDPNPDDPLVPE 122
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 124 bits (298), Expect = 3e-29
Identities = 52/68 (76%), Positives = 58/68 (85%)
Frame = +2
Query: 50 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 229
MA KRIN+EL+DL RDPP CSAGP G+D+F WQATIMGP DSP+ GGVF +TIHFP DY
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 230 PFKPPKVA 253
PFKPPKVA
Sbjct: 61 PFKPPKVA 68
Score = 116 bits (279), Expect = 7e-27
Identities = 54/84 (64%), Positives = 62/84 (73%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALT 342
GP+ + FL FP PF+ K T++YHPNINSNGSICLDIL+ QWSPALT
Sbjct: 39 GPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALT 98
Query: 343 ISKVLLSICSLLCDPNPDDPLVPK 414
+SKVLLSICSLL DPNPDDPLVP+
Sbjct: 99 VSKVLLSICSLLTDPNPDDPLVPE 122
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 122 bits (295), Expect = 8e-29
Identities = 52/69 (75%), Positives = 58/69 (84%)
Frame = +2
Query: 47 QMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 226
+MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP DSPY GGVF +TIHFP D
Sbjct: 30 EMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPD 89
Query: 227 YPFKPPKVA 253
YPFKPPKVA
Sbjct: 90 YPFKPPKVA 98
Score = 117 bits (281), Expect = 4e-27
Identities = 56/84 (66%), Positives = 62/84 (73%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALT 342
GPS S FL FP PF+ K T+++HPNINSNGSICLDIL+ QWSPALT
Sbjct: 69 GPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALT 128
Query: 343 ISKVLLSICSLLCDPNPDDPLVPK 414
ISKVLLSICSLL DPNPDDPLVP+
Sbjct: 129 ISKVLLSICSLLTDPNPDDPLVPE 152
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 122 bits (293), Expect = 1e-28
Identities = 52/68 (76%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 229
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP DSPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 230 PFKPPKVA 253
PFKPPKVA
Sbjct: 61 PFKPPKVA 68
Score = 117 bits (281), Expect = 4e-27
Identities = 56/84 (66%), Positives = 62/84 (73%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALT 342
GPS S FL FP PF+ K T+++HPNINSNGSICLDIL+ QWSPALT
Sbjct: 39 GPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALT 98
Query: 343 ISKVLLSICSLLCDPNPDDPLVPK 414
ISKVLLSICSLL DPNPDDPLVP+
Sbjct: 99 ISKVLLSICSLLTDPNPDDPLVPE 122
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 122 bits (293), Expect = 1e-28
Identities = 52/68 (76%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 229
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP DSPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 230 PFKPPKVA 253
PFKPPKVA
Sbjct: 61 PFKPPKVA 68
Score = 116 bits (280), Expect = 5e-27
Identities = 55/84 (65%), Positives = 62/84 (73%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALT 342
GPS S FL FP PF+ K T+++HPN+NSNGSICLDIL+ QWSPALT
Sbjct: 39 GPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALT 98
Query: 343 ISKVLLSICSLLCDPNPDDPLVPK 414
ISKVLLSICSLL DPNPDDPLVP+
Sbjct: 99 ISKVLLSICSLLTDPNPDDPLVPE 122
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 121 bits (291), Expect = 2e-28
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 229
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 230 PFKPPKVA 253
PFKPPKVA
Sbjct: 61 PFKPPKVA 68
Score = 78.2 bits (184), Expect = 2e-15
Identities = 38/66 (57%), Positives = 44/66 (66%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALT 342
GP+ S FL FP PF+ K T+++HPNINSNGSICLDIL+ QWSPALT
Sbjct: 39 GPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALT 98
Query: 343 ISKVLL 360
ISKV L
Sbjct: 99 ISKVTL 104
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 121 bits (291), Expect = 2e-28
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 229
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 230 PFKPPKVA 253
PFKPPKVA
Sbjct: 61 PFKPPKVA 68
Score = 116 bits (278), Expect = 9e-27
Identities = 55/84 (65%), Positives = 62/84 (73%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALT 342
GP+ S FL FP PF+ K T+++HPNINSNGSICLDIL+ QWSPALT
Sbjct: 39 GPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALT 98
Query: 343 ISKVLLSICSLLCDPNPDDPLVPK 414
ISKVLLSICSLL DPNPDDPLVP+
Sbjct: 99 ISKVLLSICSLLTDPNPDDPLVPE 122
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 121 bits (291), Expect = 2e-28
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 229
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 230 PFKPPKVA 253
PFKPPKVA
Sbjct: 61 PFKPPKVA 68
Score = 116 bits (278), Expect = 9e-27
Identities = 55/84 (65%), Positives = 62/84 (73%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALT 342
GP+ S FL FP PF+ K T+++HPNINSNGSICLDIL+ QWSPALT
Sbjct: 39 GPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALT 98
Query: 343 ISKVLLSICSLLCDPNPDDPLVPK 414
ISKVLLSICSLL DPNPDDPLVP+
Sbjct: 99 ISKVLLSICSLLTDPNPDDPLVPE 122
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 120 bits (288), Expect = 5e-28
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 229
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 230 PFKPPKVA 253
PFKPPKVA
Sbjct: 61 PFKPPKVA 68
Score = 116 bits (278), Expect = 9e-27
Identities = 55/84 (65%), Positives = 62/84 (73%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALT 342
GPS + FL FP PF+ K T+++HPNINSNGSICLDIL+ QWSPALT
Sbjct: 39 GPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALT 98
Query: 343 ISKVLLSICSLLCDPNPDDPLVPK 414
ISKVLLSICSLL DPNPDDPLVP+
Sbjct: 99 ISKVLLSICSLLTDPNPDDPLVPE 122
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 120 bits (288), Expect = 5e-28
Identities = 51/68 (75%), Positives = 57/68 (83%)
Frame = +2
Query: 50 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 229
MA KRI +EL+DL +DPP CSAGP ED+FHWQATIMGP +SPY GGVF +TIHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 230 PFKPPKVA 253
PFKPPKVA
Sbjct: 61 PFKPPKVA 68
Score = 116 bits (278), Expect = 9e-27
Identities = 55/84 (65%), Positives = 62/84 (73%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALT 342
GPS + FL FP PF+ K T+++HPNINSNGSICLDIL+ QWSPALT
Sbjct: 39 GPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALT 98
Query: 343 ISKVLLSICSLLCDPNPDDPLVPK 414
ISKVLLSICSLL DPNPDDPLVP+
Sbjct: 99 ISKVLLSICSLLTDPNPDDPLVPE 122
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 118 bits (283), Expect = 2e-27
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = +2
Query: 50 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 229
MA +RI +EL++L RDPP CSAGP GED+FHWQATIMGP +SPY GGVF + IHFP DY
Sbjct: 1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 230 PFKPPKV 250
PFKPPKV
Sbjct: 61 PFKPPKV 67
Score = 113 bits (273), Expect = 4e-26
Identities = 54/84 (64%), Positives = 62/84 (73%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALT 342
GP+ S FL FP PF+ K T+++HPNINSNG+ICLDIL+ QWSPALT
Sbjct: 39 GPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALT 98
Query: 343 ISKVLLSICSLLCDPNPDDPLVPK 414
ISKVLLSICSLL DPNPDDPLVP+
Sbjct: 99 ISKVLLSICSLLTDPNPDDPLVPE 122
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 117 bits (282), Expect = 3e-27
Identities = 49/68 (72%), Positives = 58/68 (85%)
Frame = +2
Query: 50 MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDY 229
MA KRI +EL+DL +DPP+ CSAGP ED+FHWQATIMGP +SPY GGVF ++IHFP DY
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 230 PFKPPKVA 253
PFKPPKV+
Sbjct: 61 PFKPPKVS 68
Score = 115 bits (276), Expect = 2e-26
Identities = 55/84 (65%), Positives = 61/84 (72%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALT 342
GP + FL FP PF+ K T++YHPNINSNGSICLDIL+ QWSPALT
Sbjct: 39 GPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALT 98
Query: 343 ISKVLLSICSLLCDPNPDDPLVPK 414
ISKVLLSICSLL DPNPDDPLVP+
Sbjct: 99 ISKVLLSICSLLTDPNPDDPLVPE 122
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 116 bits (279), Expect = 7e-27
Identities = 59/105 (56%), Positives = 68/105 (64%)
Frame = +1
Query: 100 TSTMFGRPTR*RSVPLASHNYGPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPN 279
TS +F P + GP+ S FL FP PF+ K T+++HPN
Sbjct: 19 TSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN 78
Query: 280 INSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPLVPK 414
INSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVP+
Sbjct: 79 INSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 123
Score = 114 bits (274), Expect = 3e-26
Identities = 50/69 (72%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = +2
Query: 50 MALKRINRELQDLGRDPPAQCS-AGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 226
MA KRI +EL+DL +DPP C AGP ED+FHWQATIMGP +SPY GGVF +TIHFP D
Sbjct: 1 MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60
Query: 227 YPFKPPKVA 253
YPFKPPKVA
Sbjct: 61 YPFKPPKVA 69
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 109 bits (261), Expect = 1e-24
Identities = 49/68 (72%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Frame = +2
Query: 50 MALKRINRELQDLGRDPPAQCSAGPHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHFPTD 226
MA KRI+REL+D+ R PPA CSAGP E D+FHWQATIMGP DSPY GGVF ++I F +D
Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSD 60
Query: 227 YPFKPPKV 250
YPFKPPKV
Sbjct: 61 YPFKPPKV 68
Score = 99 bits (238), Expect = 6e-22
Identities = 49/84 (58%), Positives = 56/84 (66%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALT 342
GP S F F PF+ K T++YHPNI+S GSICLDIL+ QWSPA T
Sbjct: 40 GPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPT 99
Query: 343 ISKVLLSICSLLCDPNPDDPLVPK 414
SKVLLSICSLL DPNP+DPLVP+
Sbjct: 100 TSKVLLSICSLLTDPNPNDPLVPE 123
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 102 bits (245), Expect = 9e-23
Identities = 41/64 (64%), Positives = 52/64 (81%)
Frame = +2
Query: 59 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 238
KRI RE+ +L DPP CSAGP G++L+HW ATI+GP +PY+GG+FFL I FP+DYPFK
Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFK 98
Query: 239 PPKV 250
PPK+
Sbjct: 99 PPKL 102
Score = 67.7 bits (158), Expect = 3e-12
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = +1
Query: 214 FPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNP 393
FP PF+ K TRIYH N+++ G + ++ILR WSPALTI+KVL +I S+ P P
Sbjct: 91 FPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEP 150
Query: 394 DDPLVP 411
P +P
Sbjct: 151 YSPALP 156
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 88.6 bits (210), Expect = 2e-18
Identities = 40/67 (59%), Positives = 48/67 (71%)
Frame = +1
Query: 214 FPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNP 393
FP PF+ K T IYHPNIN GSIC++IL+ +W+PAL + KVLLSI LL PNP
Sbjct: 62 FPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNP 121
Query: 394 DDPLVPK 414
DDPLVP+
Sbjct: 122 DDPLVPE 128
Score = 64.5 bits (150), Expect = 3e-11
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2
Query: 113 SAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPK 247
S G + +++ W A I GP +PY+GG+F L+I FPTDYPFKPPK
Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPK 72
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 77.8 bits (183), Expect = 3e-15
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +1
Query: 217 PYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPD 396
P P K T+IYHPNI+ G ICLDIL+ +WSPAL I VLLSI +LL PNPD
Sbjct: 61 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
Query: 397 DPL 405
DPL
Sbjct: 121 DPL 123
Score = 58.0 bits (134), Expect = 2e-09
Identities = 26/64 (40%), Positives = 38/64 (59%)
Frame = +2
Query: 59 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 238
+RI +E Q L +P SA P +++ ++ I+GP SPY+GGVF L + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 239 PPKV 250
PKV
Sbjct: 68 APKV 71
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 77.8 bits (183), Expect = 3e-15
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +1
Query: 217 PYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPD 396
P P K T+IYHPNI+ G ICLDIL+ +WSPAL I VLLSI +LL PNPD
Sbjct: 61 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
Query: 397 DPL 405
DPL
Sbjct: 121 DPL 123
Score = 59.3 bits (137), Expect = 1e-09
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +2
Query: 59 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 238
+RI +E Q L +P SA P E++ ++ I+GP SPY+GGVF L + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 239 PPKV 250
PKV
Sbjct: 68 APKV 71
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 77.8 bits (183), Expect = 3e-15
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +1
Query: 217 PYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPD 396
P P K T+IYHPNI+ G ICLDIL+ +WSPAL I VLLSI +LL PNPD
Sbjct: 28 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 87
Query: 397 DPL 405
DPL
Sbjct: 88 DPL 90
Score = 44.4 bits (100), Expect = 3e-05
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 143 HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
++ I+GP SPY+GGVF L + P +YP PKV
Sbjct: 3 YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKV 38
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 74.1 bits (174), Expect = 3e-14
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = +1
Query: 259 TRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDP 402
+R++HPNI ++GSICLDIL+ QWSP ++ VL SI SLLCDPNPD P
Sbjct: 74 SRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSP 121
Score = 73.3 bits (172), Expect = 6e-14
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +2
Query: 53 ALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYP 232
A KR+ + + L +DPP S P ++ HW A I GP D+P+ GG F LT+HF DYP
Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYP 64
Query: 233 FKPPKV 250
KPP V
Sbjct: 65 NKPPIV 70
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 74.1 bits (174), Expect = 3e-14
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +1
Query: 211 TFPYRLPFQTTKSCITTRIYHPNINS-NGSICLDILRAQWSPALTISKVLLSICSLLCDP 387
T P PF+ K +T+++HPNI+S +G+ICLDIL+ QWSPALT+ L+SI +LL P
Sbjct: 57 TMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAP 116
Query: 388 NPDDP 402
P DP
Sbjct: 117 EPKDP 121
Score = 55.6 bits (128), Expect = 1e-08
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 62 RINRELQDLGRDPPAQ-CSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 238
RI +ELQD R+ + P ++L TI GP+ +PY+GG F + I P YPF+
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 239 PPKV 250
PPK+
Sbjct: 66 PPKM 69
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 71.7 bits (168), Expect = 2e-13
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +1
Query: 259 TRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDP 402
+R++HPNI ++GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P
Sbjct: 74 SRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Score = 69.7 bits (163), Expect = 8e-13
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +2
Query: 44 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 223
S A KR+ R+ + L +DPPA S P ++ W A I GP D+P+ GG F L++ F
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSE 61
Query: 224 DYPFKPPKV 250
DYP KPP V
Sbjct: 62 DYPNKPPTV 70
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 71.7 bits (168), Expect = 2e-13
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +1
Query: 259 TRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDP 402
+R++HPNI ++GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P
Sbjct: 74 SRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Score = 69.7 bits (163), Expect = 8e-13
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +2
Query: 44 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 223
S A KR+ R+ + L +DPPA S P ++ W A I GP D+P+ GG F L++ F
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSE 61
Query: 224 DYPFKPPKV 250
DYP KPP V
Sbjct: 62 DYPNKPPTV 70
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 71.7 bits (168), Expect = 2e-13
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +1
Query: 259 TRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDP 402
+R++HPNI ++GSICLDIL+ QWSP ++ +L SI SLLCDPNP+ P
Sbjct: 74 SRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Score = 69.7 bits (163), Expect = 8e-13
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +2
Query: 44 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 223
S A KR+ R+ + L +DPPA S P ++ W A I GP D+P+ GG F L++ F
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSE 61
Query: 224 DYPFKPPKV 250
DYP KPP V
Sbjct: 62 DYPNKPPTV 70
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 69.3 bits (162), Expect = 1e-12
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Frame = +1
Query: 217 PYRLPFQTTKSCITTRIYHPNINSNGSICLDIL----RAQWSPALTISKVLLSICSLLCD 384
P R PFQ T IYHPNI+++G ICLDIL + W P+L IS VL S+ LL +
Sbjct: 71 PERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSE 130
Query: 385 PNPDDPLV 408
PNPDD L+
Sbjct: 131 PNPDDGLM 138
Score = 40.7 bits (91), Expect = 4e-04
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Frame = +2
Query: 62 RINRELQDLGRDPP-----AQCSAGPHGEDLFHWQATI----MGPVDSPYQGGVFFLTIH 214
R+ +EL+ L DPP S+ +G F +TI GP D+ Y G+F L I
Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQ 69
Query: 215 FPTDYPFKPPKVA 253
P YPF+PP V+
Sbjct: 70 IPERYPFQPPIVS 82
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 66.5 bits (155), Expect = 7e-12
Identities = 32/64 (50%), Positives = 45/64 (70%)
Frame = +1
Query: 217 PYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPD 396
P + P++ K T+I+HPNI+ G I +DIL ++WS ALTI+ VLLSICS+L NP
Sbjct: 86 PPKYPYEPPKITFKTKIFHPNISEIGEIFVDILGSRWSSALTINLVLLSICSIL--SNPV 143
Query: 397 DPLV 408
+PL+
Sbjct: 144 EPLL 147
Score = 61.3 bits (142), Expect = 3e-10
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +2
Query: 122 PHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
P E++F W+AT+ GPV PY+ GVF +++H P YP++PPK+
Sbjct: 54 PSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKI 96
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 63.3 bits (147), Expect = 7e-11
Identities = 28/78 (35%), Positives = 46/78 (58%)
Frame = +2
Query: 11 LVESQYNST*NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQG 190
+ + +YN A+KRI +E++++ +P + P E++F WQ I GP D+ ++G
Sbjct: 1 MADERYN---RKNPAVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEG 57
Query: 191 GVFFLTIHFPTDYPFKPP 244
G++ I P DYPFKPP
Sbjct: 58 GIYHGRIQLPADYPFKPP 75
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 62.9 bits (146), Expect = 9e-11
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 163 GPS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNIN-SNGSICLDILRAQWSPAL 339
GPS F + P P Q + T+I+HPN++ G ICLDIL+ WSPA
Sbjct: 43 GPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAW 102
Query: 340 TISKVLLSICSLLCDPNPDDPL 405
T+ V +I +L+ P PD PL
Sbjct: 103 TLQSVCRAIIALMAHPEPDSPL 124
Score = 50.4 bits (115), Expect = 5e-07
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 47 QMALKRINRELQDLGRDPPAQCSAGPHGED--LFHWQATIMGPVDSPYQGGVFFLTIHFP 220
Q + R+ +E +++ R+ A +D +F W A I GP ++PY+GGVF L P
Sbjct: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
Query: 221 TDYPFKPPKV 250
YP +PP+V
Sbjct: 62 EPYPLQPPQV 71
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 62.9 bits (146), Expect = 9e-11
Identities = 30/65 (46%), Positives = 41/65 (63%)
Frame = +1
Query: 211 TFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPN 390
TF PF++ K T +HPN++ G+ICLDIL+ +WS A + +LLSI SLL +PN
Sbjct: 90 TFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPN 149
Query: 391 PDDPL 405
PL
Sbjct: 150 ISSPL 154
Score = 56.4 bits (130), Expect = 7e-09
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +2
Query: 35 T*NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIH 214
T +S LKR+ EL L SA P +++F W+ TI G D+ ++G + L++
Sbjct: 31 TVDSHSVLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLT 90
Query: 215 FPTDYPFKPPKV 250
F DYPFK PKV
Sbjct: 91 FSNDYPFKSPKV 102
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 62.9 bits (146), Expect = 9e-11
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +1
Query: 229 PFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPNPDDPL 405
P + K T++YHPNI+ G++CL+ILR W P L I+ V+ + L +PN +DPL
Sbjct: 90 PHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPL 148
Score = 29.9 bits (64), Expect = 0.74
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 62 RINRELQDLGRDPPAQCSAG-PHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 235
R+++++ +L P C P+G+ DL +++ TI P + Y G F + YP
Sbjct: 35 RLHKDISELNL--PKSCKISFPNGKNDLMNFEVTIK-PDEGYYLSGNFVFSFQVSNMYPH 91
Query: 236 KPPKV 250
+ PKV
Sbjct: 92 EAPKV 96
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 61.3 bits (142), Expect = 3e-10
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +2
Query: 35 T*NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIH 214
T +SQ LKR+ EL L SA P +++F W+ TI G D+ ++G + L++
Sbjct: 30 TVDSQSVLKRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLS 89
Query: 215 FPTDYPFKPPKV 250
F DYPFKPPKV
Sbjct: 90 FSNDYPFKPPKV 101
Score = 60.5 bits (140), Expect = 5e-10
Identities = 29/65 (44%), Positives = 40/65 (61%)
Frame = +1
Query: 211 TFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLLCDPN 390
+F PF+ K T +HPN++ G+ICLDIL+ +WS A + +LLSI SLL +PN
Sbjct: 89 SFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPN 148
Query: 391 PDDPL 405
PL
Sbjct: 149 ISSPL 153
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 59.3 bits (137), Expect = 1e-09
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +2
Query: 41 NSQMALKRINRELQDLGRDPPAQCSAGPHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHF 217
NSQ L + ++L+DL + P SAG E ++F W TI+GP D+ Y+GG F+ + F
Sbjct: 2 NSQACLL-LQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSF 60
Query: 218 PTDYPFKPPKV 250
P +YP PP V
Sbjct: 61 PQNYPNSPPTV 71
Score = 45.2 bits (102), Expect = 2e-05
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Frame = +1
Query: 196 FLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRA-------------QWSPA 336
F +FP P T+ I+HPN+ +G +C+ IL +W+P
Sbjct: 54 FYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPV 113
Query: 337 LTISKVLLSICSLLCDPNPDDP 402
T+ ++LSI S+L PN + P
Sbjct: 114 HTVESIMLSIISMLSGPNDESP 135
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 58.0 bits (134), Expect = 2e-09
Identities = 26/64 (40%), Positives = 38/64 (59%)
Frame = +2
Query: 59 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 238
+RI +E Q L +P SA P +++ ++ I+GP SPY+GGVF L + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 239 PPKV 250
PKV
Sbjct: 68 APKV 71
Score = 56.4 bits (130), Expect = 7e-09
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = +1
Query: 217 PYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICS 372
P P K T+IYHPNI+ G ICLDIL+ +WSPAL I VLL S
Sbjct: 61 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLRYMS 112
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 57.2 bits (132), Expect = 4e-09
Identities = 29/80 (36%), Positives = 42/80 (52%)
Frame = +1
Query: 166 PS*QSLSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILRAQWSPALTI 345
P L R H FP+ P K T+I+HPN+ SNG IC++ L+ W+P+L +
Sbjct: 53 PYENGLFRMKLALSHDFPHSPP----KGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGL 108
Query: 346 SKVLLSICSLLCDPNPDDPL 405
VL + LL +P P+ L
Sbjct: 109 RHVLSVVRCLLIEPFPESAL 128
Score = 48.4 bits (110), Expect = 2e-06
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 56 LKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 235
+K++ +EL+ L PP + ED A I GPV +PY+ G+F + + D+P
Sbjct: 12 IKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPH 71
Query: 236 KPPK 247
PPK
Sbjct: 72 SPPK 75
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 56.4 bits (130), Expect = 7e-09
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +2
Query: 41 NSQMALKRINRELQDLGRDPPAQCSAGPHGE-DLFHWQATIMGPVDSPYQGGVFFLTIHF 217
N+Q +L + ++L+DL + P SAG E ++F W +IMGP D+ Y+GG F + F
Sbjct: 3 NNQASLL-LQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSF 61
Query: 218 PTDYPFKPPKV 250
P +YP PP V
Sbjct: 62 PENYPVSPPTV 72
Score = 47.6 bits (108), Expect = 3e-06
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 13/77 (16%)
Frame = +1
Query: 211 TFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILR-------------AQWSPALTISK 351
+FP P T+ ++HPN+ S+G +C+ IL +W+P T+
Sbjct: 60 SFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVES 119
Query: 352 VLLSICSLLCDPNPDDP 402
++LSI S+L PN + P
Sbjct: 120 IVLSIISMLSGPNDESP 136
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 55.6 bits (128), Expect = 1e-08
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +2
Query: 56 LKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 235
+KR+ +E + L ++P + A P D+ W + G +P+ GG ++ I FP +YP+
Sbjct: 7 IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPY 66
Query: 236 KPPKV 250
KPP +
Sbjct: 67 KPPGI 71
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 55.6 bits (128), Expect = 1e-08
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +2
Query: 56 LKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 235
+KR+ +E + L ++P + A P D+ W + G +P+ GG ++ I FP +YP+
Sbjct: 7 IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPY 66
Query: 236 KPPKV 250
KPP +
Sbjct: 67 KPPGI 71
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 54.8 bits (126), Expect = 2e-08
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 217 PYRLPFQTTKSCITTRIYHPNINS-NGSICLDILRAQWSPALTISKVLLS-ICSLLCDPN 390
P P+++ T+IYHPN++ +GS+CLD++ WSP + V + + LL PN
Sbjct: 56 PDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPN 115
Query: 391 PDDPL 405
P DPL
Sbjct: 116 PSDPL 120
Score = 37.9 bits (84), Expect = 0.003
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 164 GPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
GP DS YQGGV+ + + P YP+K P V
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSV 66
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 54.8 bits (126), Expect = 2e-08
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 217 PYRLPFQTTKSCITTRIYHPNINS-NGSICLDILRAQWSPALTISKVLLS-ICSLLCDPN 390
P P+++ T+IYHPN++ +GS+CLD++ WSP + V + + LL PN
Sbjct: 56 PDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPN 115
Query: 391 PDDPL 405
P DPL
Sbjct: 116 PSDPL 120
Score = 36.7 bits (81), Expect = 0.006
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 164 GPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
GP DS Y+GGV+ + + P YP+K P V
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSV 66
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 54.0 bits (124), Expect = 4e-08
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 214 FPYRLPFQTTKSC-ITTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 378
FP P + + + HP+I SNG ICLDIL WSPA+T+S V +SI S+L
Sbjct: 69 FPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSML 124
Score = 33.5 bits (73), Expect = 0.060
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 44 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 223
S++A R+ +EL + +PP ++L W + G + Y + L + FP
Sbjct: 13 SKIACNRLQKELSEWQVNPPTGFKHRVT-DNLQKWVIEVTGAPGTLYANETYNLQVEFPQ 71
Query: 224 DYPFKPPKV 250
YP + P+V
Sbjct: 72 HYPMEAPQV 80
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 53.6 bits (123), Expect = 5e-08
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +1
Query: 217 PYRLPFQTTKSCITTRIYHPNIN-SNGSICLDILRAQWSPALTISKVLLS-ICSLLCDPN 390
P P+++ +IYHPN++ S+G++CLD++ WSP + V S + LL PN
Sbjct: 56 PEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPN 115
Query: 391 PDDP 402
P DP
Sbjct: 116 PSDP 119
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 131 EDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
+DL + T GP DS YQGGV+ + + P YP+K P V
Sbjct: 27 DDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSV 66
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 52.8 bits (121), Expect = 9e-08
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 271 HPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 378
HP+I SNG ICLDIL WSPA+T+S + +SI S+L
Sbjct: 89 HPHIYSNGHICLDILYDSWSPAMTVSSICISILSML 124
Score = 35.5 bits (78), Expect = 0.015
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +2
Query: 44 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 223
S++A R+ +EL + +PP ++L W ++G + Y + L + FP
Sbjct: 13 SKIATNRLQKELVEWQMNPPTGFKHKVT-DNLQRWIIEVIGAPGTLYANDTYQLQVDFPE 71
Query: 224 DYPFKPPKVASQH 262
YP + P+V H
Sbjct: 72 HYPMESPQVIFLH 84
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 52.8 bits (121), Expect = 9e-08
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 214 FPYRLPFQTTKSC-ITTRIYHPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 378
FP P + + ++ HP+I SNG ICLDIL WSPA+T++ V +SI S+L
Sbjct: 69 FPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSML 124
Score = 33.9 bits (74), Expect = 0.046
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 44 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 223
S++A R+ +EL + +PP ++L W + G + Y + L + FP
Sbjct: 13 SKIACNRLQKELSEWQLNPPTGFRHKVT-DNLQKWTIDVTGAPGTLYANETYQLQVEFPE 71
Query: 224 DYPFKPPKV 250
YP + P+V
Sbjct: 72 HYPMEAPQV 80
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 229 PFQTTKSCITTRIYHPNINSNGSICLDILRAQ--WSPALTISKVLLSICSLLCDPNPDDP 402
P + K +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP
Sbjct: 70 PSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLDTPNPADP 129
Score = 47.2 bits (107), Expect = 5e-06
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +2
Query: 44 SQMALKRINRELQDLGRDPPAQCSAGPH-GED----LFHWQATIMGPVDSPYQGGVFFLT 208
S +A R+ E + ++ P A P G+D L W TI G + ++GG F LT
Sbjct: 3 SGIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLT 62
Query: 209 IHFPTDYPFKPPK 247
+HF DYP KPPK
Sbjct: 63 MHFSEDYPSKPPK 75
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 50.4 bits (115), Expect = 5e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 271 HPNINSNGSICLDILRAQWSPALTISKVLLSICSLL 378
HP+I SNG ICLD+L WSPA+ +S + LSI S+L
Sbjct: 89 HPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSML 124
Score = 35.9 bits (79), Expect = 0.011
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +2
Query: 44 SQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPT 223
+++A R+ +E + +PP+ ++L W + G + Y + L + FP
Sbjct: 13 TKIATNRLQKEFMEWQTNPPSGFKHRV-SDNLQRWIIEVHGVPGTLYANETYQLQVEFPE 71
Query: 224 DYPFKPPKVASQH 262
YP + P+V QH
Sbjct: 72 HYPMEAPQVIFQH 84
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 47.2 bits (107), Expect = 5e-06
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 13/77 (16%)
Frame = +1
Query: 211 TFPYRLPFQTTKSCITTRIYHPNINSNGSICLDILR-------------AQWSPALTISK 351
TFP P T+ ++HPN+ S+G +C+ IL +W+P T+
Sbjct: 91 TFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVES 150
Query: 352 VLLSICSLLCDPNPDDP 402
++LSI S+L PN + P
Sbjct: 151 IMLSIISMLSGPNDESP 167
Score = 46.8 bits (106), Expect = 6e-06
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 134 DLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
++F W TI+GP D+ Y+GG F + FP +YP PP V
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTV 103
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 43.2 bits (97), Expect = 7e-05
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 59 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 238
K+++++ + L + P + + + +A I+G +PYQ G+FF H P+DYP
Sbjct: 853 KKVDQDWKILQNNLPDGIFVRAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSV 912
Query: 239 PP 244
PP
Sbjct: 913 PP 914
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 42.7 bits (96), Expect = 1e-04
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +2
Query: 59 KRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFK 238
KRI E + L +D P + + +A I+G +PY G+FF I FP YP
Sbjct: 335 KRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPST 394
Query: 239 PPKV 250
PP V
Sbjct: 395 PPIV 398
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 41.5 bits (93), Expect = 2e-04
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +2
Query: 41 NSQMALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFP 220
+S+ +K++ + + L D P S + +A I+G +PY G+FF I FP
Sbjct: 268 HSKNWVKKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFP 327
Query: 221 TDYPFKPPKV 250
YP PP V
Sbjct: 328 DTYPSVPPNV 337
Score = 41.1 bits (92), Expect = 3e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 149 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
+A I+G +PY G+FF I FP YP PPKV
Sbjct: 638 RAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKV 671
Score = 39.1 bits (87), Expect = 0.001
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 149 QATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
+A I+G +PY G+FF I FP YP PP V
Sbjct: 950 RAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNV 983
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 146 WQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVASQ 259
W TI+GP ++ Y+G +F L + DYP PP V Q
Sbjct: 47 WTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQ 84
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 128 GEDLF--HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
G+D++ W TI+GP ++ ++G ++ L + DYP KPP V
Sbjct: 41 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTV 83
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 128 GEDLF--HWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKV 250
G+D++ W TI+GP ++ ++G ++ L + DYP KPP V
Sbjct: 40 GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTV 82
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +2
Query: 56 LKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPF 235
+K++ +E +L + P E + +A ++G +PY G+FF I P YP
Sbjct: 664 VKKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPH 723
Query: 236 KPPKV 250
+PP V
Sbjct: 724 EPPMV 728
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 37.5 bits (83), Expect = 0.004
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 146 WQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVASQ 259
W TI+GP ++ Y+G +F L + +YP PP V Q
Sbjct: 47 WTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQ 84
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 33.9 bits (74), Expect = 0.046
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 128 GEDLF--HWQATIMGPVD-SPYQGGVFFLTIHFPTDYPFKPPKV 250
G+D++ W TI+GP + + ++G ++ L + DYP KPP V
Sbjct: 41 GDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTV 84
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 33.9 bits (74), Expect = 0.046
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 128 GEDLF--HWQATIMGPVD-SPYQGGVFFLTIHFPTDYPFKPPKV 250
G+D++ W TI+GP + + ++G ++ L + DYP KPP V
Sbjct: 40 GDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTV 83
>At1g23760.1 68414.m02998 BURP domain-containing protein /
polygalacturonase, putative similar to polygalacturonase
isoenzyme 1 beta subunit [Lycopersicon esculentum]
GI:170480; contains Pfam profile PF03181: BURP domain
Length = 622
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 181 LSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINS 288
+ +RSFLP + +LPF T+K R++H N NS
Sbjct: 428 MPKRSFLP-RSIVSKLPFSTSKIAEIKRVFHANDNS 462
>At3g17180.1 68416.m02191 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase II SP:P08819
[Triticum aestivum] (Carlsberg Res. Commun.
52:297-311(1987))
Length = 478
Score = 29.9 bits (64), Expect = 0.74
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = -2
Query: 274 DDKYVL*CNFWWFERVVCREMYGKEENSSLIRTVNWAHNCGLPMEQIFT 128
D+K +L + W V+ +Y +++ ++ NW+ C + M +FT
Sbjct: 231 DNKGIL--EYAWSHAVISDHLYDSAKHNCDFKSSNWSEPCNVAMNTVFT 277
>At1g09790.1 68414.m01098 phytochelatin synthetase-related contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 454
Score = 29.5 bits (63), Expect = 0.98
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 314 CVHSGHQRSPYPKCCSQSAHFY 379
CV+S + SP PKCC + FY
Sbjct: 219 CVYSQFRSSPSPKCCVSLSAFY 240
>At4g08150.1 68417.m01346 homeobox protein knotted-1 like 1 (KNAT1)
identical to homeobox protein knotted-1 like 1 (KNAT1)
SP:P46639 from [Arabidopsis thaliana]
Length = 398
Score = 28.7 bits (61), Expect = 1.7
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 151 SHNYGPS*QSLSRRSFLPYHT-FPYR---LPFQTTKSCITTRIYHPNINSNGSI 300
S NYGP + + + H FP+ LP QTT++C + PN N+N S+
Sbjct: 43 SSNYGPGYNNTNNNNHHHQHMLFPHMSSLLP-QTTENCFRSDHDQPNNNNNPSV 95
>At4g19330.1 68417.m02848 kelch repeat-containing F-box family
protein very low similarity to SKP1 interacting partner
6 [Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 537
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 388 WDRIEVSRLRATLWIW*ALVTTVHAECQDRWNH 290
WDR VSRL AT IW A+++ + W H
Sbjct: 458 WDRA-VSRLTATKEIWCAMISLEKGHDGEIWGH 489
>At4g19250.1 68417.m02839 kelch repeat-containing protein contains
Pfam profile PF01344: Kelch motif
Length = 228
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 388 WDRIEVSRLRATLWIW*ALVTTVHAECQDRWNH 290
WDR VSRL AT IW A+++ + W H
Sbjct: 173 WDRA-VSRLTATKEIWCAMISLEKGHDGEIWGH 204
>At1g70370.1 68414.m08095 BURP domain-containing protein /
polygalacturonase, putative similar to polygalacturonase
isoenzyme 1 beta subunit [Lycopersicon esculentum]
GI:170480; contains Pfam profile PF03181: BURP domain
Length = 626
Score = 28.3 bits (60), Expect = 2.3
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 181 LSRRSFLPYHTFPYRLPFQTTKSCITTRIYHPNINSN-GSICLD 309
+ +RSFLP + +LPF T+K RI+H NS G I D
Sbjct: 432 MPKRSFLP-RSIITKLPFSTSKLGEIKRIFHAVENSTMGGIITD 474
>At4g23790.1 68417.m03421 expressed protein many other Arabidopsis
putative proteins
Length = 430
Score = 27.9 bits (59), Expect = 3.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 229 PFQTTKSCITTRIYHPNINSNGSICLDILRAQWSP 333
P T KSC + H N +NG LD L +W P
Sbjct: 93 PIYTNKSCGSLIDGHQNCITNGRPDLDFLYWKWKP 127
>At3g53590.1 68416.m05919 leucine-rich repeat transmembrane protein
kinase, putative CLV1 receptor kinase, Arabidopsis
thaliana, EMBL:ATU96879
Length = 783
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 421 FFSLAPKGRLGWDRIEVSRLRATLWIW 341
+ L PKGR+ +++ EV R+R W
Sbjct: 328 YLKLVPKGRITFNKSEVIRIRDRFMSW 354
>At2g06850.1 68415.m00767 xyloglucan:xyloglucosyl transferase /
xyloglucan endotransglycosylase / endo-xyloglucan
transferase (EXT) (EXGT-A1) identical to endo-xyloglucan
transferase (ext) GI:469484 and endoxyloglucan
transferase (EXGT-A1) GI:5533309 from [Arabidopsis
thaliana]
Length = 296
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -2
Query: 409 APKGRLGWDRIEVSRLRATLW---IW*ALVTTVHAECQDR 299
A +GR+ WD+ E L A W W + T++ C DR
Sbjct: 241 ATQGRMWWDQKEFRDLDAEQWRRLKWVRMKWTIYNYCTDR 280
>At5g03905.1 68418.m00370 hesB-like domain-containing protein low
similarity to HesB [Cyanothece sp. PCC 8801] GI:2183309;
contains Pfam profile PF01521: HesB-like domain
Length = 158
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 383 SHRSEQIESNTLDMVSAGDHCARRM 309
S S Q ES++ D+V D+C RRM
Sbjct: 37 SSSSSQPESSSNDVVHLSDNCIRRM 61
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,827,531
Number of Sequences: 28952
Number of extensions: 249150
Number of successful extensions: 713
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 655255392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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