Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1074
         (402 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CDD63 Cluster: Myotubularin-related family prot...    31   6.4  
UniRef50_Q7TA04 Cluster: ORF_11; n=1; Adoxophyes orana granulovi...    31   6.4  
UniRef50_Q72LR6 Cluster: Cytoplasmic membrane protein; n=2; Lept...    31   8.5  
UniRef50_Q8I2Z2 Cluster: Transporter, putative; n=1; Plasmodium ...    31   8.5  
UniRef50_Q7RFA7 Cluster: Putative uncharacterized protein PY0480...    31   8.5  
UniRef50_Q5CPH8 Cluster: Putative uncharacterized protein; n=1; ...    31   8.5  
UniRef50_Q4XU51 Cluster: Putative uncharacterized protein; n=1; ...    31   8.5  
UniRef50_A0DKT7 Cluster: Chromosome undetermined scaffold_540, w...    31   8.5  

>UniRef50_UPI00006CDD63 Cluster: Myotubularin-related family
           protein; n=1; Tetrahymena thermophila SB210|Rep:
           Myotubularin-related family protein - Tetrahymena
           thermophila SB210
          Length = 756

 Score = 31.5 bits (68), Expect = 6.4
 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
 Frame = -2

Query: 401 FIGLVLD-IFTR-VFKYFDAIFT*FKNKTKQRVGWNLLSIFKQVFRSMIN 258
           F+GL++D  F + ++KY   ++  + ++ +Q  GWN+ +I K+  R  IN
Sbjct: 252 FMGLLIDNAFNKEIYKYPAFVYKKYNDEEQQFNGWNIYNIKKEFERMRIN 301


>UniRef50_Q7TA04 Cluster: ORF_11; n=1; Adoxophyes orana
           granulovirus|Rep: ORF_11 - Adoxophyes orana granulovirus
           (AoGV)
          Length = 459

 Score = 31.5 bits (68), Expect = 6.4
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 161 DNSLNFINNSSTVVNDVYNYIHVGGYSQTKNIYLSLNEKPV 283
           ++  NF+ N  T +N+   + H+GG    +  Y +LNE P+
Sbjct: 377 EDLFNFVKNK-TAINEKNRFYHLGGSYFLEETYFTLNEIPI 416


>UniRef50_Q72LR6 Cluster: Cytoplasmic membrane protein; n=2;
           Leptospira interrogans|Rep: Cytoplasmic membrane protein
           - Leptospira interrogans serogroup Icterohaemorrhagiae
           serovarcopenhageni
          Length = 270

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +3

Query: 129 VAFFKNMFNIQIILLTSLIIVVQL*MMYITTYMSVVTLKQRTFIYH 266
           ++F KN   I   +LTSLI+++ L + + +      T K  +F+YH
Sbjct: 135 ISFIKNSEPILSFMLTSLIVIIVLLLYFKSPLKKGETEKHFSFLYH 180


>UniRef50_Q8I2Z2 Cluster: Transporter, putative; n=1; Plasmodium
           falciparum 3D7|Rep: Transporter, putative - Plasmodium
           falciparum (isolate 3D7)
          Length = 1379

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +2

Query: 161 DNSLNFINNSSTVVNDVYNYIHVGGYSQTKNIYLSLNEKPV*KYSEGS--IQPFV 319
           D+S  ++N  + + N  YN I + G +   NIY   N KPV KY   S  +QP +
Sbjct: 219 DSSYYYMNGQNNINNYNYNNIIIKGGNIHNNIY--YNTKPVDKYEHYSKCLQPVI 271


>UniRef50_Q7RFA7 Cluster: Putative uncharacterized protein PY04800;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04800 - Plasmodium yoelii yoelii
          Length = 3038

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 161 DNSLNFINNSSTVVNDVYNYIHVGGYSQTKNIYLSL 268
           +NS+  INN   V  DVYNY ++  Y   K  YL +
Sbjct: 816 NNSIKNINNIYIVKKDVYNY-YINKYYSNKKCYLDI 850


>UniRef50_Q5CPH8 Cluster: Putative uncharacterized protein; n=1;
           Cryptosporidium parvum Iowa II|Rep: Putative
           uncharacterized protein - Cryptosporidium parvum Iowa II
          Length = 123

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +2

Query: 155 YTDNSLNFINNSSTVVNDVY--NYIHVGGYSQTKNIYLSLN 271
           Y   S +FINN + + ND+Y  N I +G  +   +I++ LN
Sbjct: 76  YQMTSFSFINNLTIIENDIYNMNLIAIGSNNGMISIFIKLN 116


>UniRef50_Q4XU51 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 557

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 161 DNSLNFINNSSTVVNDVYNYIHVGGYSQTKNIYLSL 268
           +NS+  INN   V  DVYNY ++  Y   K  YL +
Sbjct: 400 NNSIKDINNIYIVKKDVYNY-YINKYYSNKKCYLDI 434


>UniRef50_A0DKT7 Cluster: Chromosome undetermined scaffold_540,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_540,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 157

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 271 RKTCLKILRRFHPTLCFVLFLNYVNIASKYLKTRVNISRTRPIN 402
           R  C KI +RF     F+ FL    ++ KYL T  N+   +P+N
Sbjct: 6   RFQCFKITQRFRYAGVFIQFLVITLLSIKYLFTIQNLYSQQPVN 49


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,096,047
Number of Sequences: 1657284
Number of extensions: 5573905
Number of successful extensions: 15543
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15534
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)