Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1074
         (402 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1025 + 8861153-8861376,8861929-8863027                           27   5.6  
10_08_0339 + 16922509-16923876,16923941-16924384,16924469-169246...    27   7.3  

>07_01_1025 + 8861153-8861376,8861929-8863027
          Length = 440

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 15/57 (26%), Positives = 23/57 (40%)
 Frame = +1

Query: 220 HTCRWLLSNKEHLFIIERKTCLKILRRFHPTLCFVLFLNYVNIASKYLKTRVNISRT 390
           HTC WL S    L ++    C     R  P   F   L Y+N    ++ T   + ++
Sbjct: 27  HTCAWLASGFVLLALLHLLCCAPAGTR--PAAAFSPLLQYINNTYSFVSTVPGVGKS 81


>10_08_0339 +
           16922509-16923876,16923941-16924384,16924469-16924655,
           16924750-16925702
          Length = 983

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 235 LLSNKEHLFIIERKTCLKILRRFHP 309
           L  + E L ++ER++   +LRR+HP
Sbjct: 476 LARDTEELAVVERRSFSPVLRRWHP 500


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,162,736
Number of Sequences: 37544
Number of extensions: 128380
Number of successful extensions: 243
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)