Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1074
         (402 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50062-1|AAC32232.1|  671|Homo sapiens RIP protein kinase protein.     29   7.7  
U25994-1|AAC50137.1|  372|Homo sapiens RIP protein.                    29   7.7  
BC126256-1|AAI26257.1|  671|Homo sapiens receptor (TNFRSF)-inter...    29   7.7  
BC126254-1|AAI26255.1|  671|Homo sapiens receptor (TNFRSF)-inter...    29   7.7  
AY682848-1|AAT74626.1|  671|Homo sapiens receptor (TNFRSF)-inter...    29   7.7  
AL031963-3|CAD70625.1|  671|Homo sapiens receptor (TNFRSF)-inter...    29   7.7  
AB208926-1|BAD92163.1|  519|Homo sapiens receptor (TNFRSF)-inter...    29   7.7  

>U50062-1|AAC32232.1|  671|Homo sapiens RIP protein kinase protein.
          Length = 671

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 158 TDNSLNF-INNSSTVVNDVYNYIHVGGYSQT--KNIYLSLNEKPV*KY 292
           TD S+ + I NS+ +    YNY+ +GG S +   +   +  E+P  KY
Sbjct: 525 TDESIKYTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKY 572


>U25994-1|AAC50137.1|  372|Homo sapiens RIP protein.
          Length = 372

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 158 TDNSLNF-INNSSTVVNDVYNYIHVGGYSQT--KNIYLSLNEKPV*KY 292
           TD S+ + I NS+ +    YNY+ +GG S +   +   +  E+P  KY
Sbjct: 226 TDESIKYTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKY 273


>BC126256-1|AAI26257.1|  671|Homo sapiens receptor
           (TNFRSF)-interacting serine-threonine kinase 1 protein.
          Length = 671

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 158 TDNSLNF-INNSSTVVNDVYNYIHVGGYSQT--KNIYLSLNEKPV*KY 292
           TD S+ + I NS+ +    YNY+ +GG S +   +   +  E+P  KY
Sbjct: 525 TDESIKYTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKY 572


>BC126254-1|AAI26255.1|  671|Homo sapiens receptor
           (TNFRSF)-interacting serine-threonine kinase 1 protein.
          Length = 671

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 158 TDNSLNF-INNSSTVVNDVYNYIHVGGYSQT--KNIYLSLNEKPV*KY 292
           TD S+ + I NS+ +    YNY+ +GG S +   +   +  E+P  KY
Sbjct: 525 TDESIKYTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKY 572


>AY682848-1|AAT74626.1|  671|Homo sapiens receptor
           (TNFRSF)-interacting serine-threonine kinase 1 protein.
          Length = 671

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 158 TDNSLNF-INNSSTVVNDVYNYIHVGGYSQT--KNIYLSLNEKPV*KY 292
           TD S+ + I NS+ +    YNY+ +GG S +   +   +  E+P  KY
Sbjct: 525 TDESIKYTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKY 572


>AL031963-3|CAD70625.1|  671|Homo sapiens receptor
           (TNFRSF)-interacting serine-threonine kinase 1 protein.
          Length = 671

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 158 TDNSLNF-INNSSTVVNDVYNYIHVGGYSQT--KNIYLSLNEKPV*KY 292
           TD S+ + I NS+ +    YNY+ +GG S +   +   +  E+P  KY
Sbjct: 525 TDESIKYTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKY 572


>AB208926-1|BAD92163.1|  519|Homo sapiens receptor
           (TNFRSF)-interacting serine-threonine kinase 1 variant
           protein.
          Length = 519

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 158 TDNSLNF-INNSSTVVNDVYNYIHVGGYSQT--KNIYLSLNEKPV*KY 292
           TD S+ + I NS+ +    YNY+ +GG S +   +   +  E+P  KY
Sbjct: 373 TDESIKYTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKY 420


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,152,660
Number of Sequences: 237096
Number of extensions: 753532
Number of successful extensions: 1155
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)