Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1074
         (402 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3133|AAO41226.1|  358|Drosophila melanogaster CG9614-PI...    28   5.4  
AE014134-1668|AAF52794.2|  327|Drosophila melanogaster CG3881-PA...    28   5.4  
AY113488-1|AAM29493.1|  435|Drosophila melanogaster RE47056p pro...    27   9.4  
AE014134-1066|AAF52356.2|  808|Drosophila melanogaster CG31640-P...    27   9.4  

>AE014296-3133|AAO41226.1|  358|Drosophila melanogaster CG9614-PI,
           isoform I protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
 Frame = +3

Query: 33  SSRKLNNTNHS-LELIYY----RISS*LLRQLRVIDTVAFFKNM 149
           SS+KLNNT HS LE+I++    ++ S  L +L    T+A + NM
Sbjct: 110 SSKKLNNTRHSRLEVIFFNRGAKVGSEALMEL--TQTMAPYNNM 151


>AE014134-1668|AAF52794.2|  327|Drosophila melanogaster CG3881-PA,
           isoform A protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = +3

Query: 276 NLFKNTQKVPSNPLFRFVFKLRKYCVEIFKDSREYIKNQ 392
           NLF+N  KV  +  FR + +    C E ++D R++++++
Sbjct: 2   NLFENENKVKDSMNFRPLNETVHICSESYEDRRQFMQDK 40


>AY113488-1|AAM29493.1|  435|Drosophila melanogaster RE47056p
           protein.
          Length = 435

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 401 FIGLVLDIFTRVFKYFDAIFT*FKNKTKQRVGWNLLSIFKQVF 273
           FIG+V+ + T +     AI     ++TK+  G N+L  F+  F
Sbjct: 164 FIGVVIVVLTTIIILLVAIILFIVSRTKRARGSNVLDAFQYSF 206


>AE014134-1066|AAF52356.2|  808|Drosophila melanogaster CG31640-PA
           protein.
          Length = 808

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 401 FIGLVLDIFTRVFKYFDAIFT*FKNKTKQRVGWNLLSIFKQVF 273
           FIG+V+ + T +     AI     ++TK+  G N+L  F+  F
Sbjct: 406 FIGVVIVVLTTIIILLVAIILFIVSRTKRARGSNVLDAFQYSF 448


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,425,714
Number of Sequences: 53049
Number of extensions: 243459
Number of successful extensions: 511
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)