Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1073
(501 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 156 1e-38
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 134 3e-32
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 126 1e-29
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 126 1e-29
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 126 1e-29
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 117 4e-27
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 117 4e-27
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 114 4e-26
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 114 4e-26
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 114 4e-26
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 114 4e-26
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 114 4e-26
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 102 2e-22
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 102 2e-22
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 99 2e-21
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 97 6e-21
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 95 2e-20
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 95 3e-20
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 90 1e-18
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 89 2e-18
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 89 2e-18
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 89 2e-18
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 88 3e-18
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 87 5e-18
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 87 7e-18
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 86 2e-17
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 85 4e-17
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 85 4e-17
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 85 4e-17
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 83 1e-16
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 82 2e-16
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 82 2e-16
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 82 2e-16
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 81 4e-16
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 81 6e-16
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 77 5e-15
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 77 1e-14
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 75 2e-14
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 75 4e-14
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 72 3e-13
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 67 6e-12
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 67 6e-12
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 64 7e-11
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 57 8e-09
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 55 3e-08
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 54 8e-08
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 53 1e-07
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 53 1e-07
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 52 2e-07
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 51 4e-07
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 50 7e-07
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 50 9e-07
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 50 1e-06
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 50 1e-06
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 50 1e-06
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 50 1e-06
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 50 1e-06
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 48 5e-06
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 47 9e-06
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 46 1e-05
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 45 3e-05
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 45 3e-05
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 45 4e-05
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 45 4e-05
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 43 1e-04
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 43 1e-04
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 43 1e-04
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 43 1e-04
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 42 2e-04
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 42 3e-04
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 41 4e-04
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 40 8e-04
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 40 8e-04
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 38 0.003
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 38 0.003
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 38 0.003
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 38 0.003
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 38 0.003
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 38 0.003
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 38 0.005
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 38 0.005
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 36 0.012
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 36 0.012
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 36 0.012
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 36 0.012
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 34 0.067
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 34 0.067
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 34 0.067
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 33 0.12
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 33 0.12
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 32 0.20
Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical p... 32 0.27
Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 31 0.36
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 31 0.36
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 31 0.62
U23511-3|AAC46790.1| 636|Caenorhabditis elegans Small protein 6... 29 1.4
AF104017-1|AAD12261.1| 636|Caenorhabditis elegans serine-threon... 29 1.4
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 29 1.9
AC024749-2|AAF60435.2| 444|Caenorhabditis elegans Hypothetical ... 27 5.8
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 156 bits (378), Expect = 1e-38
Identities = 70/81 (86%), Positives = 77/81 (95%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+LRFADDTYTESYISTIGVDFKIRT++L+GKTIKLQIWDTAGQERFRTITSSYYRGAHGI
Sbjct: 28 LLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 87
Query: 434 IIVYDCTDQDSFNTVKQWF*E 496
I+VYD TDQ++FN VKQW E
Sbjct: 88 IVVYDITDQETFNNVKQWLQE 108
Score = 51.2 bits (117), Expect = 4e-07
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 189 PEYDYLFKLLLIGDSGVGKSCL 254
PEYDYLFKLLLIGDSGVGKSCL
Sbjct: 6 PEYDYLFKLLLIGDSGVGKSCL 27
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 134 bits (325), Expect = 3e-32
Identities = 56/81 (69%), Positives = 73/81 (90%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+LRFAD+T++E+YI+TIGVDFKIRT+D+NG+ +KLQIWDTAGQERFRTITS+YYRG HG+
Sbjct: 27 LLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRGTHGV 86
Query: 434 IIVYDCTDQDSFNTVKQWF*E 496
++VYD T+ +SF VK+W E
Sbjct: 87 VVVYDVTNGESFGNVKRWLQE 107
Score = 40.3 bits (90), Expect = 8e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 192 EYDYLFKLLLIGDSGVGKSCL 254
+YD+LFKLL+IGDSGVGKS L
Sbjct: 6 DYDHLFKLLIIGDSGVGKSSL 26
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 126 bits (303), Expect = 1e-29
Identities = 53/78 (67%), Positives = 68/78 (87%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+ RF+DD++ S+ISTIG+DFKIRT++L+GK IKLQIWDTAGQERFRTIT++YYRGA GI
Sbjct: 25 LFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGI 84
Query: 434 IIVYDCTDQDSFNTVKQW 487
I+VYD T++ SF +K W
Sbjct: 85 ILVYDITNERSFENIKNW 102
Score = 44.0 bits (99), Expect = 6e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKSCL 254
YDYLFKLLLIGDSGVGK+C+
Sbjct: 5 YDYLFKLLLIGDSGVGKTCV 24
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 126 bits (303), Expect = 1e-29
Identities = 53/78 (67%), Positives = 68/78 (87%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+ RF+DD++ S+ISTIG+DFKIRT++L+GK IKLQIWDTAGQERFRTIT++YYRGA GI
Sbjct: 25 LFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGI 84
Query: 434 IIVYDCTDQDSFNTVKQW 487
I+VYD T++ SF +K W
Sbjct: 85 ILVYDITNERSFENIKNW 102
Score = 44.0 bits (99), Expect = 6e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKSCL 254
YDYLFKLLLIGDSGVGK+C+
Sbjct: 5 YDYLFKLLLIGDSGVGKTCV 24
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 126 bits (303), Expect = 1e-29
Identities = 53/78 (67%), Positives = 68/78 (87%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+ RF+DD++ S+ISTIG+DFKIRT++L+GK IKLQIWDTAGQERFRTIT++YYRGA GI
Sbjct: 25 LFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGI 84
Query: 434 IIVYDCTDQDSFNTVKQW 487
I+VYD T++ SF +K W
Sbjct: 85 ILVYDITNERSFENIKNW 102
Score = 44.0 bits (99), Expect = 6e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKSCL 254
YDYLFKLLLIGDSGVGK+C+
Sbjct: 5 YDYLFKLLLIGDSGVGKTCV 24
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 117 bits (282), Expect = 4e-27
Identities = 49/76 (64%), Positives = 64/76 (84%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIII 439
RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTAGQERF TIT+SYYRGA GI++
Sbjct: 28 RFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIML 87
Query: 440 VYDCTDQDSFNTVKQW 487
VYD T+ SF+ + +W
Sbjct: 88 VYDITNAKSFDNIAKW 103
Score = 41.1 bits (92), Expect = 4e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKSCL 254
YD LFKLLLIGDSGVGK+C+
Sbjct: 6 YDMLFKLLLIGDSGVGKTCI 25
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 117 bits (282), Expect = 4e-27
Identities = 49/76 (64%), Positives = 64/76 (84%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIII 439
RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTAGQERF TIT+SYYRGA GI++
Sbjct: 28 RFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIML 87
Query: 440 VYDCTDQDSFNTVKQW 487
VYD T+ SF+ + +W
Sbjct: 88 VYDITNAKSFDNIAKW 103
Score = 41.1 bits (92), Expect = 4e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKSCL 254
YD LFKLLLIGDSGVGK+C+
Sbjct: 6 YDMLFKLLLIGDSGVGKTCI 25
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 114 bits (274), Expect = 4e-26
Identities = 44/78 (56%), Positives = 66/78 (84%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+ R+ DD++T +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++YYRGA G
Sbjct: 39 LFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGF 98
Query: 434 IIVYDCTDQDSFNTVKQW 487
I++YD T+++SFN+V+ W
Sbjct: 99 ILMYDITNEESFNSVQDW 116
Score = 32.3 bits (70), Expect = 0.20
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKS 248
+DY+FKLL+IG+S VGK+
Sbjct: 19 FDYMFKLLIIGNSSVGKT 36
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 114 bits (274), Expect = 4e-26
Identities = 44/78 (56%), Positives = 66/78 (84%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+ R+ DD++T +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++YYRGA G
Sbjct: 39 LFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGF 98
Query: 434 IIVYDCTDQDSFNTVKQW 487
I++YD T+++SFN+V+ W
Sbjct: 99 ILMYDITNEESFNSVQDW 116
Score = 32.3 bits (70), Expect = 0.20
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKS 248
+DY+FKLL+IG+S VGK+
Sbjct: 19 FDYMFKLLIIGNSSVGKT 36
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 114 bits (274), Expect = 4e-26
Identities = 44/78 (56%), Positives = 66/78 (84%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+ R+ DD++T +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++YYRGA G
Sbjct: 39 LFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGF 98
Query: 434 IIVYDCTDQDSFNTVKQW 487
I++YD T+++SFN+V+ W
Sbjct: 99 ILMYDITNEESFNSVQDW 116
Score = 32.3 bits (70), Expect = 0.20
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKS 248
+DY+FKLL+IG+S VGK+
Sbjct: 19 FDYMFKLLIIGNSSVGKT 36
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 114 bits (274), Expect = 4e-26
Identities = 44/78 (56%), Positives = 66/78 (84%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+ R+ DD++T +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++YYRGA G
Sbjct: 53 LFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGF 112
Query: 434 IIVYDCTDQDSFNTVKQW 487
I++YD T+++SFN+V+ W
Sbjct: 113 ILMYDITNEESFNSVQDW 130
Score = 32.3 bits (70), Expect = 0.20
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKS 248
+DY+FKLL+IG+S VGK+
Sbjct: 33 FDYMFKLLIIGNSSVGKT 50
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 114 bits (274), Expect = 4e-26
Identities = 44/78 (56%), Positives = 66/78 (84%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+ R+ DD++T +++ST+G+DFK++TV K +KLQIWDTAGQER+RTIT++YYRGA G
Sbjct: 39 LFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGF 98
Query: 434 IIVYDCTDQDSFNTVKQW 487
I++YD T+++SFN+V+ W
Sbjct: 99 ILMYDITNEESFNSVQDW 116
Score = 32.3 bits (70), Expect = 0.20
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKS 248
+DY+FKLL+IG+S VGK+
Sbjct: 19 FDYMFKLLIIGNSSVGKT 36
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 102 bits (244), Expect = 2e-22
Identities = 43/81 (53%), Positives = 57/81 (70%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+LRF DD + +TIGVDF++ ++ ++G +KL IWDTAGQERFRT+T SYYRGA G+
Sbjct: 1 MLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGV 60
Query: 434 IIVYDCTDQDSFNTVKQWF*E 496
I VYD T + SF + W E
Sbjct: 61 ICVYDVTSRSSFEKLNHWMQE 81
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 102 bits (244), Expect = 2e-22
Identities = 43/81 (53%), Positives = 57/81 (70%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+LRF DD + +TIGVDF++ ++ ++G +KL IWDTAGQERFRT+T SYYRGA G+
Sbjct: 28 MLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGV 87
Query: 434 IIVYDCTDQDSFNTVKQWF*E 496
I VYD T + SF + W E
Sbjct: 88 ICVYDVTSRSSFEKLNHWMQE 108
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 210 KLLLIGDSGVGKSCL 254
K+L+IG+SGVGKS L
Sbjct: 13 KILIIGESGVGKSSL 27
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 99.1 bits (236), Expect = 2e-21
Identities = 42/78 (53%), Positives = 60/78 (76%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
V RF + T+ + +TIGVDF ++T+ ++GK +KLQIWDT GQERFRTIT SYYR A+GI
Sbjct: 27 VQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQERFRTITQSYYRSANGI 86
Query: 434 IIVYDCTDQDSFNTVKQW 487
++ YD T + SF ++++W
Sbjct: 87 VLCYDITCKQSFGSLQRW 104
Score = 37.9 bits (84), Expect = 0.004
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKSCL 254
+DYLFK++L+GD GVGK+C+
Sbjct: 7 FDYLFKIVLVGDMGVGKTCV 26
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 97.1 bits (231), Expect = 6e-21
Identities = 42/82 (51%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+LRFA++++ +IST+GVDFK++T+ L I+L++WDTAG ER+RTI +SYY AHG+
Sbjct: 23 LLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGMERYRTIYNSYYHSAHGV 82
Query: 434 IIVYDCTDQDSF-NTVKQWF*E 496
+ VYD T++ SF N K W E
Sbjct: 83 MCVYDMTNEKSFENLEKYWLKE 104
Score = 31.5 bits (68), Expect = 0.36
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKSCL 254
Y++LFK++++GD GKSC+
Sbjct: 3 YNHLFKIVVVGDHNCGKSCI 22
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/78 (55%), Positives = 56/78 (71%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+L+F D + + TIGV+F R V ++GK IKLQIWDTAGQE FR+IT SYYRGA G
Sbjct: 23 LLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGA 82
Query: 434 IIVYDCTDQDSFNTVKQW 487
++VYD T +D+FN + W
Sbjct: 83 LLVYDITRRDTFNHLTSW 100
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKSCL 254
Y YLFK ++IGD+GVGKSCL
Sbjct: 3 YAYLFKYIIIGDTGVGKSCL 22
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 95.1 bits (226), Expect = 3e-20
Identities = 43/81 (53%), Positives = 55/81 (67%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
V +F + +TIGVDF I+TV + IKLQIWDTAGQERFR+IT SYYR AH I
Sbjct: 24 VRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAGQERFRSITQSYYRSAHAI 83
Query: 434 IIVYDCTDQDSFNTVKQWF*E 496
++VYD + Q SF+ + +W E
Sbjct: 84 VLVYDVSCQPSFDCLPEWLGE 104
Score = 37.1 bits (82), Expect = 0.007
Identities = 13/21 (61%), Positives = 20/21 (95%)
Frame = +3
Query: 192 EYDYLFKLLLIGDSGVGKSCL 254
+Y YLFK++L+G++GVGK+CL
Sbjct: 3 DYKYLFKVVLVGNAGVGKTCL 23
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 89.8 bits (213), Expect = 1e-18
Identities = 39/79 (49%), Positives = 54/79 (68%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIII 439
RF + + STIGV+F R++ + GKT+K QIWDTAGQER+R ITS+YYRGA G ++
Sbjct: 30 RFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALL 89
Query: 440 VYDCTDQDSFNTVKQWF*E 496
VYD ++ V++W E
Sbjct: 90 VYDIAKHVTYENVERWLKE 108
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 192 EYDYLFKLLLIGDSGVGKSCL 254
EYDYLFK++LIGDSGVGKS L
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNL 27
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 89.0 bits (211), Expect = 2e-18
Identities = 39/79 (49%), Positives = 54/79 (68%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIII 439
RF + + STIGV+F R++ + GKT+K QIWDTAGQER+R ITS+YYRGA G ++
Sbjct: 30 RFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALL 89
Query: 440 VYDCTDQDSFNTVKQWF*E 496
VYD ++ V++W E
Sbjct: 90 VYDIAKHVTYENVERWLKE 108
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 192 EYDYLFKLLLIGDSGVGKSCL 254
EYDYLFK++LIGDSGVGKS L
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNL 27
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 88.6 bits (210), Expect = 2e-18
Identities = 34/79 (43%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = +2
Query: 254 VLRFADDTY-TESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHG 430
++R+ D + ++IST+G+D++ + + + K +KLQIWDTAGQERFR++T+SYYR A
Sbjct: 19 LIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSYYRDADA 78
Query: 431 IIIVYDCTDQDSFNTVKQW 487
+++VYD ++ SF + W
Sbjct: 79 LLLVYDIANRASFENCRNW 97
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 88.6 bits (210), Expect = 2e-18
Identities = 34/79 (43%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = +2
Query: 254 VLRFADDTY-TESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHG 430
++R+ D + ++IST+G+D++ + + + K +KLQIWDTAGQERFR++T+SYYR A
Sbjct: 19 LIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSYYRDADA 78
Query: 431 IIIVYDCTDQDSFNTVKQW 487
+++VYD ++ SF + W
Sbjct: 79 LLLVYDIANRASFENCRNW 97
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 88.2 bits (209), Expect = 3e-18
Identities = 37/76 (48%), Positives = 53/76 (69%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIII 439
+F + + TIGV+F R ++++G+ IKLQIWDTAGQERFR +T SYYRGA G ++
Sbjct: 30 QFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALM 89
Query: 440 VYDCTDQDSFNTVKQW 487
VYD T + ++N + W
Sbjct: 90 VYDITRRSTYNHLSSW 105
Score = 37.5 bits (83), Expect = 0.005
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKSCL 254
Y Y+FK ++IGD GVGKSCL
Sbjct: 8 YSYIFKYIIIGDMGVGKSCL 27
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 87.4 bits (207), Expect = 5e-18
Identities = 37/78 (47%), Positives = 54/78 (69%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
V+R +T ST+GVDF ++TV+++G+ + LQ+WDTAGQERFR++ SY+R A G
Sbjct: 478 VMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKSYFRRADGA 537
Query: 434 IIVYDCTDQDSFNTVKQW 487
I+VYD + SF V+ W
Sbjct: 538 ILVYDVCAEQSFLRVRDW 555
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 87.0 bits (206), Expect = 7e-18
Identities = 40/78 (51%), Positives = 50/78 (64%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
VLRF + E STIG F +TV L+ TIK +IWDTAGQER+ ++ YYRGA
Sbjct: 36 VLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMYYRGAQAA 95
Query: 434 IIVYDCTDQDSFNTVKQW 487
I+VYD T+Q+SF K W
Sbjct: 96 IVVYDITNQESFQKAKNW 113
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/42 (90%), Positives = 42/42 (100%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAG 379
+LRFADDTYTESYISTIGVDFKIRT++L+GKTIKLQIWDTAG
Sbjct: 28 LLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAG 69
Score = 51.2 bits (117), Expect = 4e-07
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 189 PEYDYLFKLLLIGDSGVGKSCL 254
PEYDYLFKLLLIGDSGVGKSCL
Sbjct: 6 PEYDYLFKLLLIGDSGVGKSCL 27
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 84.6 bits (200), Expect = 4e-17
Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = +2
Query: 251 SVLR-FADDTYTESYISTIGVDFKIRTVDLN-GKTIKLQIWDTAGQERFRTITSSYYRGA 424
S+LR F + E T+GVDF R ++L G +KLQ+WDTAGQE+FR+IT SYYR +
Sbjct: 32 SLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQEKFRSITKSYYRNS 91
Query: 425 HGIIIVYDCTDQDSFNTVKQW 487
G++ +YD T+++SF V+ W
Sbjct: 92 VGVLAIYDTTNRESFEHVENW 112
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 189 PEYDYLFKLLLIGDSGVGKSCL 254
P + Y ++L++IGDS VGKS L
Sbjct: 12 PLFHYQYRLIVIGDSTVGKSSL 33
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 84.6 bits (200), Expect = 4e-17
Identities = 35/78 (44%), Positives = 55/78 (70%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+ RF D++ +Y +TIG+DF +T+ L +TI+LQ+WDTAGQERFR++ SY R +
Sbjct: 28 ITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVA 87
Query: 434 IIVYDCTDQDSFNTVKQW 487
++VYD T+ +SF+ +W
Sbjct: 88 VVVYDITNANSFHQTTKW 105
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 84.6 bits (200), Expect = 4e-17
Identities = 34/78 (43%), Positives = 55/78 (70%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+ RF D++ +Y +TIG+DF +T+ L +T++LQ+WDTAGQERFR++ SY R +
Sbjct: 27 ITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVA 86
Query: 434 IIVYDCTDQDSFNTVKQW 487
++VYD T+ +SF+ +W
Sbjct: 87 VVVYDITNSNSFHQTSKW 104
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 83.0 bits (196), Expect = 1e-16
Identities = 33/78 (42%), Positives = 53/78 (67%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+LRF + + ST+G++F R ++++ K +KL +WDT GQERFR++ SYYR A G
Sbjct: 23 LLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQERFRSLVGSYYRHAIGA 82
Query: 434 IIVYDCTDQDSFNTVKQW 487
++VYD T ++SF ++ W
Sbjct: 83 LLVYDITSRESFYHLEHW 100
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 198 DYLFKLLLIGDSGVGKSCL 254
D++FK ++IGD GVGKS L
Sbjct: 4 DHVFKYVIIGDRGVGKSNL 22
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIII 439
RF + + TIGV+F + + + GK +K+QIWDTAG ERFR SSYYRGA G ++
Sbjct: 27 RFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMERFRCGASSYYRGALGALL 86
Query: 440 VYDCTDQDSFNTVKQW 487
VYD + ++ +V+QW
Sbjct: 87 VYDISKHKTYESVEQW 102
Score = 33.9 bits (74), Expect = 0.067
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 192 EYDYLFKLLLIGDSGVGKSCL 254
EY YLFK++LIG+ GVGKS L
Sbjct: 4 EYYYLFKIVLIGNPGVGKSNL 24
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/85 (41%), Positives = 58/85 (68%), Gaps = 9/85 (10%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLN---------GKTIKLQIWDTAGQERFRTITSSY 412
R+ D+T+T +IST+G+DFK + V G+ + LQ+WDTAGQERFR++T+++
Sbjct: 26 RYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLLQLWDTAGQERFRSLTTAF 85
Query: 413 YRGAHGIIIVYDCTDQDSFNTVKQW 487
+R A G I+++D T++ SF ++ W
Sbjct: 86 FRDAMGFILIFDITNEQSFLNIRDW 110
Score = 33.9 bits (74), Expect = 0.067
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 192 EYDYLFKLLLIGDSGVGKS 248
+YDYL K L +GDSGVGK+
Sbjct: 3 DYDYLIKFLALGDSGVGKT 21
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/85 (41%), Positives = 58/85 (68%), Gaps = 9/85 (10%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLN---------GKTIKLQIWDTAGQERFRTITSSY 412
R+ D+T+T +IST+G+DFK + V G+ + LQ+WDTAGQERFR++T+++
Sbjct: 26 RYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQRVLLQLWDTAGQERFRSLTTAF 85
Query: 413 YRGAHGIIIVYDCTDQDSFNTVKQW 487
+R A G I+++D T++ SF ++ W
Sbjct: 86 FRDAMGFILIFDITNEQSFLNIRDW 110
Score = 33.9 bits (74), Expect = 0.067
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 192 EYDYLFKLLLIGDSGVGKS 248
+YDYL K L +GDSGVGK+
Sbjct: 3 DYDYLIKFLALGDSGVGKT 21
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 81.0 bits (191), Expect = 4e-16
Identities = 33/77 (42%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLN-GKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
RF + + + +TIGVDF ++T+ + + I +Q+WDTAGQERFR+IT Y+R A G++
Sbjct: 221 RFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDTAGQERFRSITKQYFRKADGVV 280
Query: 437 IVYDCTDQDSFNTVKQW 487
+++D T + SF V+ W
Sbjct: 281 LMFDVTSEQSFLNVRNW 297
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 198 DYLFKLLLIGDSGVGKSC 251
D +FK++ +GDS VGK+C
Sbjct: 200 DRIFKVVFVGDSAVGKTC 217
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 80.6 bits (190), Expect = 6e-16
Identities = 33/78 (42%), Positives = 53/78 (67%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
VLRF ++ ++ ++STI F+ +TV++ L IWDTAGQE++ + YYRG++G+
Sbjct: 29 VLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQEKYHALGPIYYRGSNGV 88
Query: 434 IIVYDCTDQDSFNTVKQW 487
++V+D TD+ SF VK W
Sbjct: 89 LLVFDITDRKSFEKVKNW 106
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 77.4 bits (182), Expect = 5e-15
Identities = 31/78 (39%), Positives = 53/78 (67%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+LRF D+ + + +T+GV+F + + ++ ++L++WDT GQE FR+I +YYR A G
Sbjct: 23 LLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTCGQENFRSIIRAYYRNALGA 82
Query: 434 IIVYDCTDQDSFNTVKQW 487
++VYD T + SF ++QW
Sbjct: 83 LLVYDITCRKSFVHLEQW 100
Score = 30.3 bits (65), Expect = 0.82
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 198 DYLFKLLLIGDSGVGKSCL 254
D++FK ++IGD GVGKS L
Sbjct: 4 DHMFKYVIIGDGGVGKSNL 22
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 76.6 bits (180), Expect = 1e-14
Identities = 30/76 (39%), Positives = 52/76 (68%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIII 439
++ + ++ Y +TIG DF R V+++ +T+ LQIWDTAGQERF+++ ++YRGA ++
Sbjct: 28 QYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQERFQSLGVAFYRGADCCVL 87
Query: 440 VYDCTDQDSFNTVKQW 487
+D T+ SF ++ W
Sbjct: 88 AFDVTNAASFKSLDSW 103
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 204 LFKLLLIGDSGVGKSCL 254
L K++++GDSGVGK+ L
Sbjct: 9 LLKVIILGDSGVGKTSL 25
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 75.4 bits (177), Expect = 2e-14
Identities = 33/76 (43%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 FADDTYTESYISTIGVDFKIRTVDLN-GKTIKLQIWDTAGQERFRTITSSYYRGAHGIII 439
F D+T+ ++TIG+DFK + V LN G++I+LQ+WDTAGQERFR + +Y R A ++
Sbjct: 26 FLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTAGQERFRQLAPAYIRSARVALL 85
Query: 440 VYDCTDQDSFNTVKQW 487
V D +D++ + +W
Sbjct: 86 VIDLSDENCVEHLIRW 101
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 74.5 bits (175), Expect = 4e-14
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFR-TITSSYYRGAHGII 436
RF + E +TIGVDF+ R+ + + +++Q+WDTAGQER+R +I + YYR + ++
Sbjct: 119 RFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQERYRQSIVAHYYRNVNAVV 178
Query: 437 IVYDCTDQDSFNTVKQWF*E 496
VYD T ++SFN + W E
Sbjct: 179 FVYDVTCRESFNDLALWIKE 198
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 71.7 bits (168), Expect = 3e-13
Identities = 29/40 (72%), Positives = 39/40 (97%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDT 373
+LRFAD+T++E+YI+TIGVDFKIRT+D+NG+ +KLQIWDT
Sbjct: 27 LLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDT 66
Score = 40.3 bits (90), Expect = 8e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 192 EYDYLFKLLLIGDSGVGKSCL 254
+YD+LFKLL+IGDSGVGKS L
Sbjct: 6 DYDHLFKLLIIGDSGVGKSSL 26
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 67.3 bits (157), Expect = 6e-12
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTI-KLQIWDTAGQERFRTITSSYYRGAHG 430
+ RF + ++ +Y +TIGVDF ++ + ++ T+ LQIWD +GQ+R+ +T YY+ AH
Sbjct: 28 IRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQDRYGVMTRVYYKDAHA 87
Query: 431 IIIVYDCTDQDSFNTVKQW 487
IIV D T + + +W
Sbjct: 88 AIIVLDSTRERTIEGALRW 106
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 67.3 bits (157), Expect = 6e-12
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTI-KLQIWDTAGQERFRTITSSYYRGAHG 430
+ RF + ++ +Y +TIGVDF ++ + ++ T+ LQIWD +GQ+R+ +T YY+ AH
Sbjct: 28 IRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQDRYGVMTRVYYKDAHA 87
Query: 431 IIIVYDCTDQDSFNTVKQW 487
IIV D T + + +W
Sbjct: 88 AIIVLDSTRERTIEGALRW 106
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 63.7 bits (148), Expect = 7e-11
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 275 TYTESYIS-TIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDC 451
T S++S +G D++ R ++LQ+WDTAGQERFR + Y R A +IVYD
Sbjct: 84 TIGASFVSFDVGADYRDRE-----DVVRLQVWDTAGQERFRCMVPMYMRNADAALIVYDV 138
Query: 452 TDQDSFNTVKQW 487
TD+++F V++W
Sbjct: 139 TDRNTFEDVEKW 150
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 56.8 bits (131), Expect = 8e-09
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDL-NGKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
RFA +++ +SY T+G+DF R + L + + +Q+WD GQ + Y GA+ +
Sbjct: 54 RFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDIGGQSIAGEMIDKYLTGANIVF 113
Query: 437 IVYDCTDQDSFNTVKQW 487
+VYD T+ SF W
Sbjct: 114 LVYDVTNSKSFENAVDW 130
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 54.8 bits (126), Expect = 3e-08
Identities = 24/75 (32%), Positives = 44/75 (58%)
Frame = +2
Query: 257 LRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
++F T+ E Y TI DF + ++++G+ L+I DTAG E+F ++ Y + G +
Sbjct: 21 VQFVSSTFIEKYDPTIE-DFYRKEIEVDGQPSVLEILDTAGTEQFSSMRDLYIKNGQGFV 79
Query: 437 IVYDCTDQDSFNTVK 481
+VY T Q +F+ ++
Sbjct: 80 VVYSITSQQTFHDIR 94
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 53.6 bits (123), Expect = 8e-08
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
V R + + Y++T+GV+ N I+ +WDTAGQE+F + YY
Sbjct: 26 VKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCA 85
Query: 434 IIVYDCTDQDSFNTVKQW 487
II++D T + ++ V W
Sbjct: 86 IIMFDVTARVTYKNVPNW 103
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = +2
Query: 257 LRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
L+F D + E Y T ++ + V L+G+ + I DTAGQE + I +YYR G I
Sbjct: 35 LQFMYDEFVEEYEPTKADSYRKKVV-LDGEECSIDILDTAGQEDYSAIRDNYYRSGEGFI 93
Query: 437 IVYDCTDQDSFNTVKQW 487
V+ D +SF ++
Sbjct: 94 CVFSILDMESFEATNEF 110
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 365 WDTAGQERFR-TITSSYYRGAHGIIIVYDCTDQDSFNTVKQWF*E 496
WDTAGQER+R +I + YYR + ++ VYD T ++SFN + W E
Sbjct: 1 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKE 45
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/43 (51%), Positives = 33/43 (76%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQ 382
V RF + T+ + +TIGVDF ++T+ ++GK +KLQIWDTAG+
Sbjct: 27 VQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTAGE 69
Score = 37.9 bits (84), Expect = 0.004
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKSCL 254
+DYLFK++L+GD GVGK+C+
Sbjct: 7 FDYLFKIVLVGDMGVGKTCV 26
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 51.2 bits (117), Expect = 4e-07
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQE 385
+L+F D + + TIGV+F R V ++GK IKLQ+WDTAGQE
Sbjct: 23 LLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWDTAGQE 66
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKSCL 254
Y YLFK ++IGD+GVGKSCL
Sbjct: 3 YAYLFKHIIIGDTGVGKSCL 22
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 50.4 bits (115), Expect = 7e-07
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +2
Query: 257 LRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
++F + E Y TI ++ + V+++G+ L+I DTAG E+F + Y + G +
Sbjct: 21 VQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFV 79
Query: 437 IVYDCTDQDSFN 472
+VY T Q +FN
Sbjct: 80 LVYSITAQSTFN 91
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 50.0 bits (114), Expect = 9e-07
Identities = 22/78 (28%), Positives = 44/78 (56%)
Frame = +2
Query: 257 LRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
L++ + +Y +TI ++ + ++ + +L+I DTAG E+F + +YYR A G +
Sbjct: 21 LQYVQGIFVHTYDATIEDSYR-KLSKVDAENARLEILDTAGTEQFTGMRETYYRTAQGFV 79
Query: 437 IVYDCTDQDSFNTVKQWF 490
+V+ + +F +KQ F
Sbjct: 80 LVFSLAETSTFENLKQTF 97
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 49.6 bits (113), Expect = 1e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +2
Query: 266 ADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVY 445
A +TE I T+G F +R + TIKL WD GQ RFR++ Y RG + I+ +
Sbjct: 41 ASGQFTEDMIPTVG--FNMRKITKGNVTIKL--WDIGGQPRFRSMWERYCRGVNAIVFMV 96
Query: 446 DCTDQD 463
D D++
Sbjct: 97 DAADEE 102
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +2
Query: 257 LRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
++F + + Y TI D + ++ KL+I DTAGQE F T+ Y R G +
Sbjct: 35 IQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTGSGFL 93
Query: 437 IVYDCTDQDSFNTVKQ 484
IV+ TD++SF VK+
Sbjct: 94 IVFAVTDRNSFEEVKK 109
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +2
Query: 257 LRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
++F + + Y TI D + ++ KL+I DTAGQE F T+ Y R G +
Sbjct: 35 IQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTGSGFL 93
Query: 437 IVYDCTDQDSFNTVKQ 484
IV+ TD++SF VK+
Sbjct: 94 IVFAVTDRNSFEEVKK 109
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +2
Query: 257 LRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
++F + + Y TI D + ++ KL+I DTAGQE F T+ Y R G +
Sbjct: 35 IQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTGSGFL 93
Query: 437 IVYDCTDQDSFNTVKQ 484
IV+ TD++SF VK+
Sbjct: 94 IVFAVTDRNSFEEVKK 109
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +2
Query: 257 LRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
++F + + Y TI D + ++ KL+I DTAGQE F T+ Y R G +
Sbjct: 35 IQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTGSGFL 93
Query: 437 IVYDCTDQDSFNTVKQ 484
IV+ TD++SF VK+
Sbjct: 94 IVFAVTDRNSFEEVKK 109
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 49.6 bits (113), Expect = 1e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +2
Query: 266 ADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVY 445
A +TE I T+G F +R + TIKL WD GQ RFR++ Y RG + I+ +
Sbjct: 41 ASGQFTEDMIPTVG--FNMRKITKGNVTIKL--WDIGGQPRFRSMWERYCRGVNAIVFMV 96
Query: 446 DCTDQD 463
D D++
Sbjct: 97 DAADEE 102
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 48.8 bits (111), Expect = 2e-06
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
++ + + Y +Y+ T +F + V ++ K I+LQ+ DTAGQ F T+ Y A
Sbjct: 26 IVSYTTNVYPHNYVPTAFDNFSV-VVLVDKKPIRLQLHDTAGQSSFDTLRPLCYTDADVF 84
Query: 434 IIVYDCTDQDSFNTVK-QWF*E 496
+IVY D SF V W+ E
Sbjct: 85 VIVYSVVDLQSFEDVSHHWYPE 106
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 47.6 bits (108), Expect = 5e-06
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +2
Query: 257 LRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
++F + + Y TI D I+ +++G + + + DTAGQE F + Y RG G +
Sbjct: 35 IQFFQKQFVDYYDPTIE-DQYIQHCEIDGNWVIMDVLDTAGQEEFSAMREQYIRGGRGFL 93
Query: 437 IVYDCTDQDSF 469
+V+ T++ SF
Sbjct: 94 LVFSVTERKSF 104
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 207 FKLLLIGDSGVGKSCL 254
+KL++IGD GVGKS L
Sbjct: 18 YKLVVIGDGGVGKSSL 33
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 47.6 bits (108), Expect = 5e-06
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +2
Query: 257 LRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
++F + + Y TI D I+ +++G + + + DTAGQE F + Y RG G +
Sbjct: 35 IQFFQKQFVDYYDPTIE-DQYIQHCEIDGNWVIMDVLDTAGQEEFSAMREQYIRGGRGFL 93
Query: 437 IVYDCTDQDSF 469
+V+ T++ SF
Sbjct: 94 LVFSVTERKSF 104
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 207 FKLLLIGDSGVGKSCL 254
+KL++IGD GVGKS L
Sbjct: 18 YKLVVIGDGGVGKSSL 33
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 46.8 bits (106), Expect = 9e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTA 376
+ RF D++ +Y +TIG+DF +T+ L +T++LQ+WDTA
Sbjct: 27 ITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQMWDTA 67
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +2
Query: 293 ISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQD 463
I T+G F + TV K IK +WD GQ++ R + YY G +I V D D+D
Sbjct: 42 IPTVG--FNVETVTY--KNIKFNVWDVGGQDKIRPLWRHYYTGTQALIFVMDAADRD 94
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 FADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIV 442
F+ D + + Y+ T+ ++ + ++++GK ++L +WDTAGQE + + Y I++
Sbjct: 25 FSKDQFPDVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 83
Query: 443 YDCTDQDSF-NTVKQW 487
+ DS N ++W
Sbjct: 84 FSIDSPDSLENIPEKW 99
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 263 FADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIV 442
F+ D + + Y+ T+ ++ + ++++GK ++L +WDTAGQE + + Y I++
Sbjct: 25 FSKDQFPDVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 83
Query: 443 YDCTDQDSF-NTVKQW 487
+ DS N ++W
Sbjct: 84 FSIDSPDSLENIPEKW 99
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +2
Query: 257 LRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
++ + + E Y TI ++ + V ++G+T L I DTAGQE + + Y R G +
Sbjct: 21 IQLIQNHFVEEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFL 79
Query: 437 IVYDCTDQDSFNTVKQW 487
+V+ + SF V +
Sbjct: 80 LVFAVNEAKSFENVANY 96
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 207 FKLLLIGDSGVGKSCL 254
+KL+++GD GVGKS L
Sbjct: 4 YKLVVVGDGGVGKSAL 19
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +2
Query: 257 LRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGII 436
++ + + E Y TI ++ + V ++G+T L I DTAGQE + + Y R G +
Sbjct: 24 IQLIQNHFVEEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFL 82
Query: 437 IVYDCTDQDSFNTVKQW 487
+V+ + SF V +
Sbjct: 83 LVFAVNEAKSFENVANY 99
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 207 FKLLLIGDSGVGKSCL 254
+KL+++GD GVGKS L
Sbjct: 7 YKLVVVGDGGVGKSAL 22
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAG 379
+F + + TIGV+F R ++++G+ IKLQIWDTAG
Sbjct: 30 QFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAG 69
Score = 37.5 bits (83), Expect = 0.005
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 195 YDYLFKLLLIGDSGVGKSCL 254
Y Y+FK ++IGD GVGKSCL
Sbjct: 8 YSYIFKYIIIGDMGVGKSCL 27
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 293 ISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFN 472
I TIG F + TV+ K I +WD GQ++ R + Y++ G+I V D D++
Sbjct: 46 IPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVG 101
Query: 473 TVKQ 484
++
Sbjct: 102 EARE 105
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 293 ISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQD 463
I TIG F + TV+ K I +WD GQ++ R + Y++ G+I V D D++
Sbjct: 46 IPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKE 98
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 293 ISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQD 463
I TIG F + TV+ K I +WD GQ++ R + Y++ G+I V D D++
Sbjct: 46 IPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKE 98
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIW 367
+ RF D++ +Y +TIG+DF +T+ L +TI+LQIW
Sbjct: 28 ITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQIW 65
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 9/49 (18%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDL---------NGKTIKLQIWDTAG 379
R+ D+T+T +IST+G+DFK + V G+ + LQIWDTAG
Sbjct: 26 RYTDNTFTGQFISTVGIDFKEKKVVYESSRGGFGGRGQRVLLQIWDTAG 74
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 192 EYDYLFKLLLIGDSGVGKS 248
+YDYL K L GD GVGK+
Sbjct: 3 DYDYLIKFLAPGDPGVGKT 21
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 41.1 bits (92), Expect = 4e-04
Identities = 24/66 (36%), Positives = 30/66 (45%)
Frame = +2
Query: 299 TIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFNTV 478
T V V+LN L WD GQE R + ++YY A+ +I V D T D F V
Sbjct: 54 TATVGLNTGNVELNNTC--LHFWDLGGQESLRELWATYYDDANAMIFVVDATRSDLFPIV 111
Query: 479 KQWF*E 496
F E
Sbjct: 112 ASQFKE 117
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/64 (35%), Positives = 29/64 (45%)
Frame = +2
Query: 293 ISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFN 472
I TIG F + V+ K +K Q+WD GQ R YY II V D D+D
Sbjct: 45 IPTIG--FNVEQVEY--KNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVG 100
Query: 473 TVKQ 484
+Q
Sbjct: 101 ISRQ 104
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 314 FKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFN 472
F ++TV G I+L +WD GQ R S+YY +I V D D+ F+
Sbjct: 51 FNVKTVAAMGD-IRLNVWDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRFD 102
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
++ + D++ Y+ T+ ++ + + L+G + L +WDTAGQE + + Y
Sbjct: 24 LISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQEDYDRLRPLSYPQTDVF 82
Query: 434 IIVYDCTDQDSF-NTVKQWF*E 496
I+ + SF N +W E
Sbjct: 83 ILCFSVVSPVSFDNVASKWIPE 104
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
++ + D++ Y+ T+ ++ + + L+G + L +WDTAGQE + + Y
Sbjct: 24 LISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQEDYDRLRPLSYPQTDVF 82
Query: 434 IIVYDCTDQDSF-NTVKQWF*E 496
I+ + SF N +W E
Sbjct: 83 ILCFSVVSPVSFDNVASKWIPE 104
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
VLRF + + E Y STI D + + + L++ DTAGQ+ + S +G
Sbjct: 30 VLRFTQNIFPERYESTIE-DQHSKHIAAFHRDYHLRVTDTAGQQEYTVFPRSCSLDINGF 88
Query: 434 IIVYDCTDQDSF 469
I+VY D+ SF
Sbjct: 89 ILVYAIDDRKSF 100
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIII 439
+F D+ T++ T+G D I+TV K +L +WD GQ+ R+ +Y+ +I
Sbjct: 35 KFLDEP-TDTIEPTLGFD--IKTVHF--KDFQLNLWDVGGQKSLRSYWKNYFESTDALIW 89
Query: 440 VYDCTDQD 463
V D +D++
Sbjct: 90 VVDSSDRE 97
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
++ + + + YI T+ ++ + ++G+ I L +WDTAGQE + + Y
Sbjct: 20 LISYTTNAFPGEYIPTVFDNYSANVM-VDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVF 78
Query: 434 IIVYDCTDQDSFNTVK-QWF*E 496
++ + + SF V+ +W+ E
Sbjct: 79 LVCFALNNPASFENVRAKWYPE 100
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
++ + + + YI T+ ++ + ++G+ I L +WDTAGQE + + Y
Sbjct: 20 LISYTTNAFPGEYIPTVFDNYSANVM-VDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVF 78
Query: 434 IIVYDCTDQDSFNTVK-QWF*E 496
++ + + SF V+ +W+ E
Sbjct: 79 LVCFALNNPASFENVRAKWYPE 100
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
++ + + + YI T+ ++ + ++G+ I L +WDTAGQE + + Y
Sbjct: 20 LISYTTNAFPGEYIPTVFDNYSANVM-VDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVF 78
Query: 434 IIVYDCTDQDSFNTVK-QWF*E 496
++ + + SF V+ +W+ E
Sbjct: 79 LVCFALNNPASFENVRAKWYPE 100
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
++ + + + YI T+ ++ + ++G+ I L +WDTAGQE + + Y
Sbjct: 20 LISYTTNAFPGEYIPTVFDNYSANVM-VDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVF 78
Query: 434 IIVYDCTDQDSFNTVK-QWF*E 496
++ + + SF V+ +W+ E
Sbjct: 79 LVCFALNNPASFENVRAKWYPE 100
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
++ + + + YI T+ ++ + ++G+ I L +WDTAGQE + + Y
Sbjct: 20 LISYTTNAFPGEYIPTVFDNYSANVM-VDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVF 78
Query: 434 IIVYDCTDQDSFNTVK-QWF*E 496
++ + + SF V+ +W+ E
Sbjct: 79 LVCFALNNPASFENVRAKWYPE 100
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 344 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSF 469
+T L I+D G + R I S+YY HGII V D + ++F
Sbjct: 67 ETFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETF 108
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 344 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSF 469
+T L I+D G + R I S+YY HGII V D + ++F
Sbjct: 67 ETFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETF 108
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+L + + + YI T+ D V ++G+ I L +WDTAGQ+ + +
Sbjct: 20 LLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVF 78
Query: 434 IIVYDCTDQDSFNTVK-QWF*E 496
++ + + SF V+ +W+ E
Sbjct: 79 LVCFALNNPASFENVRAKWYPE 100
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 281 TESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQ 460
T + I TIG F + TV + I L +WD GQ++ R + Y+ ++ V D +D
Sbjct: 42 TVNTIPTIG--FNVETVTF--QKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDI 97
Query: 461 DSFNTVKQ 484
+ K+
Sbjct: 98 ERIPEAKE 105
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
+L + + + YI T+ D V ++G+ I L +WDTAGQ+ + +
Sbjct: 20 LLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVF 78
Query: 434 IIVYDCTDQDSFNTVK-QWF*E 496
++ + + SF V+ +W+ E
Sbjct: 79 LVCFALNNPASFENVRAKWYPE 100
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 344 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFNTVKQW 487
+T L++WD G R ++ GA G I+V+D T++ S + W
Sbjct: 64 RTELLELWDIGGMVAHRQAAQVFFEGAVGAILVHDLTNKRSEENLATW 111
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 33.9 bits (74), Expect = 0.067
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +2
Query: 272 DTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDC 451
+T ++ + T+G + T + + + + +D AGQ ++R+ SY+ + G+I V D
Sbjct: 41 ETRSQQIVPTVG---HVVT-NFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDS 96
Query: 452 TDQ 460
+D+
Sbjct: 97 SDR 99
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 33.9 bits (74), Expect = 0.067
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 332 DLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFNTVKQ 484
+++ + + IWD GQE R S+YY +I+V D +D +K+
Sbjct: 55 EVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKE 105
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 33.9 bits (74), Expect = 0.067
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +3
Query: 192 EYDYLFKLLLIGDSGVGKSCL 254
+Y YLFK++L+ ++GVGK+CL
Sbjct: 3 DYKYLFKVVLVPNAGVGKTCL 23
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/77 (20%), Positives = 37/77 (48%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
++ + + + Y+ T+ ++ + TV + G+ L ++DTAGQE + + Y
Sbjct: 20 LISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVF 78
Query: 434 IIVYDCTDQDSFNTVKQ 484
++ + SF V++
Sbjct: 79 LVCFSVVAPASFENVRE 95
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/77 (20%), Positives = 37/77 (48%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
++ + + + Y+ T+ ++ + TV + G+ L ++DTAGQE + + Y
Sbjct: 17 LISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVF 75
Query: 434 IIVYDCTDQDSFNTVKQ 484
++ + SF V++
Sbjct: 76 LVCFSVVAPASFENVRE 92
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 32.3 bits (70), Expect = 0.20
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERF 391
++ + + + YI T+ ++ + ++G+ I L +WDTAGQE +
Sbjct: 20 LISYTTNAFPGEYIPTVFDNYSANVM-VDGRPINLGLWDTAGQEDY 64
>Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical
protein T28F3.6 protein.
Length = 252
Score = 31.9 bits (69), Expect = 0.27
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +2
Query: 353 KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFNTVKQWF*E 496
++Q+WD +G +++ + A G+I+V + ++ + ++QWF E
Sbjct: 114 EIQLWDVSGDKKYEDCWPAIKENAEGVILVVN-PEEHKGSDLQQWFYE 160
>Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 31.9 bits (69), Expect = 0.27
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 245 IMSVLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTIT--SSYYR 418
I+ + +D + Y TI +++ + + L + DTAG + I +Y +
Sbjct: 185 ILRQVACVEDVTNKPYEPTIEDTYQVLLEEPDKAREILILHDTAGVSNYGPIELKKAYVQ 244
Query: 419 GAHGIIIVYDCTDQDSFNTV---KQW 487
A ++VY D +SFN V K+W
Sbjct: 245 AADAFVLVYSSADYESFNRVDLLKKW 270
>Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical
protein F52A8.6c protein.
Length = 199
Score = 31.9 bits (69), Expect = 0.27
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 245 IMSVLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTIT--SSYYR 418
I+ + +D + Y TI +++ + + L + DTAG + I +Y +
Sbjct: 20 ILRQVACVEDVTNKPYEPTIEDTYQVLLEEPDKAREILILHDTAGVSNYGPIELKKAYVQ 79
Query: 419 GAHGIIIVYDCTDQDSFNTV---KQW 487
A ++VY D +SFN V K+W
Sbjct: 80 AADAFVLVYSSADYESFNRVDLLKKW 105
>Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 31.9 bits (69), Expect = 0.27
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 245 IMSVLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTIT--SSYYR 418
I+ + +D + Y TI +++ + + L + DTAG + I +Y +
Sbjct: 185 ILRQVACVEDVTNKPYEPTIEDTYQVLLEEPDKAREILILHDTAGVSNYGPIELKKAYVQ 244
Query: 419 GAHGIIIVYDCTDQDSFNTV---KQW 487
A ++VY D +SFN V K+W
Sbjct: 245 AADAFVLVYSSADYESFNRVDLLKKW 270
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 308 VDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYD 448
+ F I T+ K +L WD G + R + YY A I V D
Sbjct: 404 IGFNIETIHY--KNYRLNFWDVGGLPKLRHLWKHYYSNAQAIFYVID 448
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/77 (19%), Positives = 36/77 (46%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
++ + + + Y+ T+ ++ + T + G+ L ++DTAGQE + + Y
Sbjct: 20 LISYTTNKFPSEYVPTVFDNYAV-TAMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVF 78
Query: 434 IIVYDCTDQDSFNTVKQ 484
++ + SF V++
Sbjct: 79 LVCFSVVAPASFENVRE 95
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 30.7 bits (66), Expect = 0.62
Identities = 15/82 (18%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 VLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGI 433
++ + + ++Y +T+ ++ + +V ++ K + ++DTAGQ + I Y A+
Sbjct: 21 LVAYTKKQFLDNYTTTVFDNWAV-SVHIDNKNYAVNLFDTAGQGNYEQIRCLSYPHANVF 79
Query: 434 IIVYDCTDQDSFNTVKQ-WF*E 496
++ + D+ + + + W E
Sbjct: 80 LVCFSMIDRKTLESCRSTWIPE 101
>U23511-3|AAC46790.1| 636|Caenorhabditis elegans Small protein 6
protein.
Length = 636
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 356 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSF 469
L I T GQ R+ + + YRG++ + + TD+DS+
Sbjct: 265 LTIIKTIGQGRYGEVRKALYRGSYVAVKTFYTTDEDSW 302
>AF104017-1|AAD12261.1| 636|Caenorhabditis elegans serine-threonine
kinase SMA-6 protein.
Length = 636
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 356 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSF 469
L I T GQ R+ + + YRG++ + + TD+DS+
Sbjct: 265 LTIIKTIGQGRYGEVRKALYRGSYVAVKTFYTTDEDSW 302
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 260 RFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQ 361
++ + + Y +TIG DF R V+++ +T+ LQ
Sbjct: 37 QYVNRRFMNQYKATIGADFLTRDVNIDDRTVTLQ 70
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 204 LFKLLLIGDSGVGKSCL 254
L K++++GDSGVGK+ L
Sbjct: 9 LLKVIILGDSGVGKTSL 25
>AC024749-2|AAF60435.2| 444|Caenorhabditis elegans Hypothetical
protein Y16E11A.1 protein.
Length = 444
Score = 27.5 bits (58), Expect = 5.8
Identities = 8/22 (36%), Positives = 17/22 (77%)
Frame = +2
Query: 299 TIGVDFKIRTVDLNGKTIKLQI 364
T+ VD+K++ + +NG+ + LQ+
Sbjct: 414 TVEVDYKLKLISVNGQNVSLQL 435
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,105,000
Number of Sequences: 27780
Number of extensions: 184833
Number of successful extensions: 577
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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