Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1072
         (412 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001593-1|AAH01593.3|  393|Homo sapiens TP53I13 protein protein.      30   3.4  
AK075341-1|BAC11555.1|  393|Homo sapiens protein ( Homo sapiens ...    30   3.4  
AB110214-1|BAD08208.1|  393|Homo sapiens damage stimulated cytop...    30   3.4  
AB110209-1|BAD08203.1|  393|Homo sapiens damage stimulated cytop...    30   3.4  
AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein.     29   4.5  
AK128680-1|BAC87567.1|  191|Homo sapiens protein ( Homo sapiens ...    29   7.9  

>BC001593-1|AAH01593.3|  393|Homo sapiens TP53I13 protein protein.
          Length = 393

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   AILAAMGVTYLVTATITSKRCSHLHIDWRRGRGVW 107
           A  AAM +T+L+     +  C+ LH ++RRG  ++
Sbjct: 310 AAWAAMALTFLLVLLTLATLCTRLHRNFRRGESIY 344


>AK075341-1|BAC11555.1|  393|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0020 fis, clone NT2RP1000255. ).
          Length = 393

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   AILAAMGVTYLVTATITSKRCSHLHIDWRRGRGVW 107
           A  AAM +T+L+     +  C+ LH ++RRG  ++
Sbjct: 310 AAWAAMALTFLLVLLTLATLCTRLHRNFRRGESIY 344


>AB110214-1|BAD08208.1|  393|Homo sapiens damage stimulated
           cytoplasmic protein1 protein.
          Length = 393

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   AILAAMGVTYLVTATITSKRCSHLHIDWRRGRGVW 107
           A  AAM +T+L+     +  C+ LH ++RRG  ++
Sbjct: 310 AAWAAMALTFLLVLLTLATLCTRLHRNFRRGESIY 344


>AB110209-1|BAD08203.1|  393|Homo sapiens damage stimulated
           cytoplasmic protein1 protein.
          Length = 393

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   AILAAMGVTYLVTATITSKRCSHLHIDWRRGRGVW 107
           A  AAM +T+L+     +  C+ LH ++RRG  ++
Sbjct: 310 AAWAAMALTFLLVLLTLATLCTRLHRNFRRGESIY 344


>AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein.
          Length = 1651

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 296  APPFKPKRITAPRQNRQGGGTYPCGLTRGPTK 201
            AP  +P R T P+Q   G G  P G  R P K
Sbjct: 1016 APAREPLRRTTPQQGASGPGRSPVGQARQPEK 1047


>AK128680-1|BAC87567.1|  191|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46844 fis, clone UTERU3001394. ).
          Length = 191

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -3

Query: 317 LSIVTTAAPPFKPKRITAPRQNRQGGGTYPCGLTRGPT 204
           L  + T  P   P R + PR  R  G + PC +T  PT
Sbjct: 145 LPCLGTGTPTLWPHRCSCPRGYRMQGPSLPCLVTGTPT 182


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,687,687
Number of Sequences: 237096
Number of extensions: 1431097
Number of successful extensions: 2743
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2743
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)