Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1072
         (412 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g31250.1 68415.m03816 glutamyl-tRNA reductase, putative simil...    27   4.9  
At4g04570.1 68417.m00670 protein kinase family protein contains ...    26   8.6  

>At2g31250.1 68415.m03816 glutamyl-tRNA reductase, putative similar
           to HEMA2 [SP|P49294], HEMA1 [SP|P42804]
          Length = 524

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 252 ILPWSSNAFRFEGWGSRCNYTETLEPSQGVWRIYVVD 362
           IL +     R++G GS     ETLE  Q V RIY +D
Sbjct: 474 ILDYPMKHLRYDGTGSS-KLRETLENMQAVNRIYELD 509


>At4g04570.1 68417.m00670 protein kinase family protein contains
           Pfam domain PF00069: Protein kinase domain
          Length = 654

 Score = 26.2 bits (55), Expect = 8.6
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -1

Query: 148 LFLISIVCCRLQDNHTPRPLLQSMCRWLHRLEVMVAVTK 32
           L  I ++C  +Q+N T RP + S+  WL    +++ + K
Sbjct: 589 LIQIGLLC--VQENSTKRPTMSSVIIWLGSETIIIPLPK 625


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,751,871
Number of Sequences: 28952
Number of extensions: 184554
Number of successful extensions: 449
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 615542944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)