Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1071
         (441 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   6.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.9  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    20   9.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.1  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 93  VGQAGVQIGNACWELYCLEHGIQPDGQMPTD 185
           +G+  V +    W LYC   G  P GQ+  D
Sbjct: 345 LGELAVCVNERPWSLYC---GEPPCGQLNPD 372


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 126 CWELYCLEHGIQPDGQMPTDKT 191
           CW  Y +   +Q  GQ+P  +T
Sbjct: 263 CWSPYIIFDLLQVFGQIPGTQT 284


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +2

Query: 89  TRWPSRSPDR*CLLGALLPGARHPA*WPD 175
           T W   + ++ C+ G L     H   WP+
Sbjct: 117 TCWNGTATEQLCIGGLLYNERTHSCDWPE 145


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 358 RCGQQLCPWSLH 393
           RCG  L P SLH
Sbjct: 701 RCGNHLPPISLH 712


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 127 QALPIWTPAWPTCTEMHSR 71
           ++ P+  PAW  CT    R
Sbjct: 184 ESQPMLWPAWVYCTRYSDR 202


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 386  HYTIGKEIGLRNLVLGNP 439
            HY I K    R LV+G P
Sbjct: 2049 HYWIEKGADRRKLVMGMP 2066


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,407
Number of Sequences: 336
Number of extensions: 2359
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)