Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1071
(441 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 140 6e-34
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 136 6e-33
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 122 1e-28
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 99 8e-22
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 66 2e-11
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 66 2e-11
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 66 2e-11
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 64 5e-11
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 62 1e-10
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 62 1e-10
03_01_0034 + 318432-318825,318902-319851 62 2e-10
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 57 7e-09
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 50 6e-07
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.54
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 0.72
08_02_0647 - 19687142-19687145,19687244-19689352,19689764-19690617 29 1.3
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 1.3
08_01_0312 + 2764744-2767390,2767632-2767990 29 1.7
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 28 2.9
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 2.9
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 2.9
07_03_0686 + 20697493-20697927 28 3.8
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 28 3.8
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 5.1
04_04_1181 + 31526672-31527099,31527580-31527677,31527923-31528089 27 5.1
10_03_0016 - 7099862-7099967,7100059-7100357,7101862-7102171,710... 27 6.7
07_01_0284 - 2082249-2082256,2082496-2083009 27 6.7
04_04_1189 + 31586991-31587291,31587358-31587397,31587449-315875... 27 6.7
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 8.8
06_01_0551 + 3930456-3930708,3932103-3932677,3932819-3933198,393... 27 8.8
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 8.8
04_03_0735 + 19141038-19143227 27 8.8
02_05_1116 - 34229234-34229440,34229534-34229593,34229663-342300... 27 8.8
02_02_0457 + 10503801-10507358 27 8.8
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 140 bits (338), Expect = 6e-34
Identities = 56/63 (88%), Positives = 62/63 (98%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 249 HVP 257
HVP
Sbjct: 61 HVP 63
Score = 105 bits (253), Expect = 1e-23
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 392 TIGKEI 409
TIGKEI
Sbjct: 109 TIGKEI 114
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 136 bits (330), Expect = 6e-33
Identities = 54/63 (85%), Positives = 62/63 (98%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 249 HVP 257
HVP
Sbjct: 61 HVP 63
Score = 105 bits (252), Expect = 2e-23
Identities = 49/66 (74%), Positives = 53/66 (80%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHY 108
Query: 392 TIGKEI 409
TIGKEI
Sbjct: 109 TIGKEI 114
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 122 bits (294), Expect = 1e-28
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 249 HVP 257
HVP
Sbjct: 61 HVP 63
Score = 105 bits (253), Expect = 1e-23
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 392 TIGKEI 409
T+GKEI
Sbjct: 109 TVGKEI 114
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 99 bits (238), Expect = 8e-22
Identities = 45/69 (65%), Positives = 54/69 (78%)
Frame = +2
Query: 203 RRFFQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 382
R F F S + RA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KEDAANN+AR
Sbjct: 106 RDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFAR 165
Query: 383 GHYTIGKEI 409
GHYT+G+E+
Sbjct: 166 GHYTVGREV 174
Score = 81.4 bits (192), Expect = 3e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 185
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 39.9 bits (89), Expect = 9e-04
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 180 TDKTIGGGDDSFNTFFSETGAGKHVP 257
+D T G D+FNTFFSET +GKHVP
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVP 123
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 242 RAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 292
Score = 54.0 bits (124), Expect = 5e-08
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +3
Query: 51 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 230
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDL--QLERVNVYYN 232
Query: 231 ETGAGKHVP 257
E G+ VP
Sbjct: 233 EASCGRFVP 241
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDL--QLERVNVYYNEASCGR 58
Query: 249 HVP 257
VP
Sbjct: 59 FVP 61
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 49.6 bits (113), Expect = 1e-06
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 239
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGTSDLQLERVNVYYNEAS 55
Query: 240 AGKHVP 257
G+ VP
Sbjct: 56 CGRFVP 61
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 64.1 bits (149), Expect = 5e-11
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 62.5 bits (145), Expect = 1e-10
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL--QLERINVYYNEASGGR 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 62.5 bits (145), Expect = 1e-10
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 47.6 bits (108), Expect = 4e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 249 HVP 257
VP
Sbjct: 59 FVP 61
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 62.1 bits (144), Expect = 2e-10
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCGR 58
Query: 249 HVP 257
VP
Sbjct: 59 FVP 61
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 56.8 bits (131), Expect = 7e-09
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTY--TGTSPQQLERINVYFNEASGGR 58
Query: 249 HVP 257
HVP
Sbjct: 59 HVP 61
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 50.4 bits (115), Expect = 6e-07
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 252 VP 257
+P
Sbjct: 61 IP 62
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHY 391
RA+ VDLEP V++ ++ YR L++ E + + A NN+A G++
Sbjct: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYH 109
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 0.54
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 208 SSPPPMVLSVGIWPSGWMPCSR 143
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 0.72
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 205 SPPPMVLSVGIWPSGWMPCSR 143
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>08_02_0647 - 19687142-19687145,19687244-19689352,19689764-19690617
Length = 988
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -3
Query: 334 WMKQLSVCASADLINNSRFKIDEDSTGTCLPAPVSLKKVLKESSPPPMVLS 182
WM LS D IN +F +++ +PA +SLK L+ES +V+S
Sbjct: 783 WMSSLSELTFLD-INVKQFGVEDMKILQNMPALLSLKLYLEESPQETLVIS 832
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 202 PPPMVLSVGIWPSGWMPCSR 143
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 169 ARCPQTRPSGVETILSTLSSARPE 240
+RCPQ RPS + +LS L ARP+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPK 991
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 28.3 bits (60), Expect = 2.9
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 398 QWCSDHGHSCWPHLP 354
++ S+HGHSCW +P
Sbjct: 26 RYISEHGHSCWSSVP 40
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 112 RSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 240
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 196 PMVLSVGIWPSGWMPCSR 143
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
>07_03_0686 + 20697493-20697927
Length = 144
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 275 LEPTVV-DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIG 412
LEP+V+ DE T + + E L++GKE+ + + +G+E+G
Sbjct: 12 LEPSVLLDETHYQTGFKNGYSEGLVSGKEEGRQVGLKNGFQVGEELG 58
>02_01_0471 -
3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 209 FFQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 346
F HF+Q + W+ + VD EP + D+ G R HP ++I
Sbjct: 95 FIMHFVQAFKEWEPQYTEQSVDQEP-ISDDTVLGCSRG--HPSEII 137
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 130 GSFTAWSTASSLMARCPQTRPS-GVETILSTLSSARP 237
GSF+A + A+ L+ARCP R V + ST P
Sbjct: 5 GSFSAAAAAARLLARCPALRADPRVLALASTAGGGGP 41
>04_04_1181 + 31526672-31527099,31527580-31527677,31527923-31528089
Length = 230
Score = 27.5 bits (58), Expect = 5.1
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 97 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPCCLRRS 276
AKPE+ S +P + T ++ASS R + +GV ++ ++ +A Y RR+
Sbjct: 72 AKPEAASAIPRATATITASASSAPPRRSVSVAAGVACAVAAVAVVGVAVAVAYVVRARRA 131
>10_03_0016 -
7099862-7099967,7100059-7100357,7101862-7102171,
7104402-7105054,7105266-7105554,7106549-7106634
Length = 580
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 325 VSSRTTYYW*GRCGQQLCPWSLH 393
VS+RTTY +C Q CPW +H
Sbjct: 239 VSNRTTYKV--KCTQAGCPWRVH 259
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 241 APVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 113
+P+ K E PPP + I W P + ++QQ +PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>04_04_1189 +
31586991-31587291,31587358-31587397,31587449-31587534,
31587535-31588097,31588250-31589913,31589956-31590066,
31590152-31591181,31591234-31591406,31591535-31591814,
31592275-31592331
Length = 1434
Score = 27.1 bits (57), Expect = 6.7
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -2
Query: 92 VYRDA--LTHFDLSFFLCLNVELNYNQSSF 9
VYRD + HFDL ++C++ N + S +
Sbjct: 306 VYRDQRIIDHFDLQIWICVSTNFNEDSSGW 335
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 26.6 bits (56), Expect = 8.8
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +3
Query: 120 NACWELYCLEHGI 158
N CW+L C+EH +
Sbjct: 467 NLCWKLICMEHAV 479
>06_01_0551 +
3930456-3930708,3932103-3932677,3932819-3933198,
3933301-3933387,3933473-3933803,3933936-3934346,
3934430-3934489,3934586-3934792
Length = 767
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 340 LFWMKQLSVCASADLINNSRFKIDEDSTGTCLPAPVS 230
LF S CA+ + + S F I+ D TG C P VS
Sbjct: 296 LFGSYAESSCAALVVASISSFGINHDFTGMCYPLLVS 332
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 26.6 bits (56), Expect = 8.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 165 DGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 257
DG++PTD G D N S+ A + P
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSP 373
>04_03_0735 + 19141038-19143227
Length = 729
Score = 26.6 bits (56), Expect = 8.8
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 73 VSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSAR 234
V+ +YT K ++ + A + A++ A TRP+GV+T ++ + R
Sbjct: 134 VTNGMYTYDKKANKRARKNAAAAAAAAAAAAAAAEATTRPAGVDTFWTSCNRCR 187
>02_05_1116 -
34229234-34229440,34229534-34229593,34229663-34230073,
34230357-34230687,34230781-34230867,34230952-34231331,
34231531-34232105,34233035-34233272
Length = 762
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 340 LFWMKQLSVCASADLINNSRFKIDEDSTGTCLPAPVS 230
LF S CA+ + + S F I+ D TG C P VS
Sbjct: 291 LFGSYAESSCAALVVASISSFGINHDFTGMCYPLLVS 327
>02_02_0457 + 10503801-10507358
Length = 1185
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2
Query: 167 WPDAHRQDHRGWRRF---FQHFLQRDRSWQARTRAVFVDLEPTVVDEVR 304
W DA R+ R W+RF F + L + TR++ V E ++ VR
Sbjct: 332 WDDALRESGRCWKRFCAPFSNVLAQGSIMLVTTRSLEVAHEVKTMEPVR 380
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,814,035
Number of Sequences: 37544
Number of extensions: 288441
Number of successful extensions: 1048
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -