Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1071
(441 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 144 4e-35
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 143 7e-35
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 142 9e-35
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 142 2e-34
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 2e-34
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 141 3e-34
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 3e-34
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 5e-34
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 6e-34
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 9e-27
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 9e-24
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 1e-21
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 5e-18
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 85 3e-17
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 81 4e-16
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 78 3e-15
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 64 6e-11
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 64 6e-11
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 63 9e-11
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 62 2e-10
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 55 2e-08
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 34 0.060
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 1.7
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18) 29 1.7
SB_54020| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_36408| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_24478| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 144 bits (348), Expect = 4e-35
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 249 HVP 257
HVP
Sbjct: 61 HVP 63
Score = 142 bits (343), Expect = 2e-34
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 252 VP 257
VP
Sbjct: 495 VP 496
Score = 111 bits (267), Expect = 2e-25
Identities = 52/66 (78%), Positives = 55/66 (83%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 482 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 541
Query: 392 TIGKEI 409
T+GKEI
Sbjct: 542 TVGKEI 547
Score = 111 bits (266), Expect = 3e-25
Identities = 51/66 (77%), Positives = 55/66 (83%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHY 108
Query: 392 TIGKEI 409
T+GKEI
Sbjct: 109 TVGKEI 114
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 143 bits (346), Expect = 7e-35
Identities = 62/65 (95%), Positives = 63/65 (96%)
Frame = +3
Query: 63 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 242
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 243 GKHVP 257
GKHVP
Sbjct: 123 GKHVP 127
Score = 142 bits (344), Expect = 1e-34
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 249 HVP 257
HVP
Sbjct: 646 HVP 648
Score = 142 bits (343), Expect = 2e-34
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 252 VP 257
VP
Sbjct: 574 VP 575
Score = 111 bits (268), Expect = 2e-25
Identities = 53/66 (80%), Positives = 55/66 (83%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 113 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 172
Query: 392 TIGKEI 409
TIGKEI
Sbjct: 173 TIGKEI 178
Score = 110 bits (265), Expect = 4e-25
Identities = 51/66 (77%), Positives = 55/66 (83%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 634 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 693
Query: 392 TIGKEI 409
T+GKE+
Sbjct: 694 TVGKEL 699
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 142 bits (345), Expect = 9e-35
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 249 HVP 257
HVP
Sbjct: 61 HVP 63
Score = 111 bits (268), Expect = 2e-25
Identities = 53/66 (80%), Positives = 55/66 (83%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 392 TIGKEI 409
TIGKEI
Sbjct: 109 TIGKEI 114
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 142 bits (343), Expect = 2e-34
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 252 VP 257
VP
Sbjct: 61 VP 62
Score = 111 bits (267), Expect = 2e-25
Identities = 52/66 (78%), Positives = 55/66 (83%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 107
Query: 392 TIGKEI 409
T+GKEI
Sbjct: 108 TVGKEI 113
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 142 bits (343), Expect = 2e-34
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 249 HVP 257
HVP
Sbjct: 61 HVP 63
Score = 109 bits (262), Expect = 1e-24
Identities = 51/66 (77%), Positives = 54/66 (81%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F S + RAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 392 TIGKEI 409
T+GKE+
Sbjct: 109 TVGKEM 114
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 141 bits (341), Expect = 3e-34
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 249 HVP 257
HVP
Sbjct: 61 HVP 63
Score = 68.1 bits (159), Expect = 3e-12
Identities = 38/65 (58%), Positives = 41/65 (63%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RAVFVDLEPTVV PEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHY 98
Query: 392 TIGKE 406
TIGK+
Sbjct: 99 TIGKQ 103
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 141 bits (341), Expect = 3e-34
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 252 VP 257
VP
Sbjct: 866 VP 867
Score = 139 bits (337), Expect = 8e-34
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 252 VP 257
VP
Sbjct: 433 VP 434
Score = 109 bits (261), Expect = 1e-24
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 406
RAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE
Sbjct: 435 RAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 484
Score = 108 bits (260), Expect = 2e-24
Identities = 50/66 (75%), Positives = 54/66 (81%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 853 FNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 912
Query: 392 TIGKEI 409
T+GKE+
Sbjct: 913 TVGKEM 918
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 140 bits (339), Expect = 5e-34
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 252 VP 257
VP
Sbjct: 480 VP 481
Score = 111 bits (268), Expect = 2e-25
Identities = 46/48 (95%), Positives = 48/48 (100%)
Frame = +3
Query: 114 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 257
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVP
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 48
Score = 107 bits (257), Expect = 4e-24
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 34 FNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 93
Query: 392 TIGKEI 409
T+GK++
Sbjct: 94 TVGKQL 99
Score = 106 bits (254), Expect = 9e-24
Identities = 47/65 (72%), Positives = 54/65 (83%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 467 FNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHY 526
Query: 392 TIGKE 406
T+GK+
Sbjct: 527 TVGKD 531
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 140 bits (338), Expect = 6e-34
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 249 HVP 257
HVP
Sbjct: 61 HVP 63
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVR 304
RAVFVDLEP+VV ++
Sbjct: 64 RAVFVDLEPSVVGRMK 79
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 9e-27
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 249 H 251
H
Sbjct: 256 H 256
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 106 bits (254), Expect = 9e-24
Identities = 45/50 (90%), Positives = 50/50 (100%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 406
RAVFVDLEPTV+DE+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE
Sbjct: 29 RAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKE 78
Score = 63.3 bits (147), Expect = 9e-11
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +3
Query: 174 MPTDKTIGGGDDSFNTFFSETGAGKHVP 257
MP+DKTIGGGDDSFNTFF+ETGAGKHVP
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVP 28
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 99.1 bits (236), Expect = 1e-21
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIGKE+
Sbjct: 975 RAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEM 1025
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 87.4 bits (207), Expect = 5e-18
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +2
Query: 287 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE+
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEL 51
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 84.6 bits (200), Expect = 3e-17
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +2
Query: 296 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE+
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEL 39
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 84.6 bits (200), Expect = 3e-17
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +2
Query: 296 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE+
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEL 39
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 81.0 bits (191), Expect = 4e-16
Identities = 33/37 (89%), Positives = 37/37 (100%)
Frame = +2
Query: 296 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 406
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKE 38
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 78.2 bits (184), Expect = 3e-15
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +2
Query: 296 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 406
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+GKE
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKE 38
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 63.7 bits (148), Expect = 6e-11
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 7 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 57
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 63.7 bits (148), Expect = 6e-11
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 275 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 325
Score = 50.4 bits (115), Expect = 6e-07
Identities = 26/68 (38%), Positives = 34/68 (50%)
Frame = +3
Query: 54 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 233
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 266
Query: 234 TGAGKHVP 257
GK+VP
Sbjct: 267 ATGGKYVP 274
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 63.3 bits (147), Expect = 9e-11
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 47.6 bits (108), Expect = 5e-06
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
R+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 50.4 bits (115), Expect = 6e-07
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 55.2 bits (127), Expect = 2e-08
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
R++ VDLEP +D VR G +F P+ + + AANN+A+GHY+ G E+
Sbjct: 18 RSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAEL 68
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 47.6 bits (108), Expect = 5e-06
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 346
RA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 62 RAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.9 bits (74), Expect = 0.060
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 251 RTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 376
+ RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 74 KARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 245
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 246 KHVPV 260
KH PV
Sbjct: 296 KHAPV 300
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 129 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 233
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 204 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 94
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18)
Length = 817
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 274 IDEDSTGTCLPAPVSLKKVLKESSPPPMVLSVGIWPSGWMPC 149
ID D T CLP PVS V PP +++ G++ C
Sbjct: 661 IDGDKTTICLPHPVSASSVPPAEYPPGTKMNIS--DGGFVAC 700
>SB_54020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2431
Score = 27.5 bits (58), Expect = 5.2
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 227 QRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQ-LFHPEQLITGKEDAANNYARGHYTIGK 403
+ D+ +A ++ D+ P +VD+ ++ L P++L +E A + H+TI
Sbjct: 1541 EEDQMMRAIALSLGQDISPMIVDQPPPPPQKEPLKEPKELTEDEEPLAKDLI-DHFTINI 1599
Query: 404 EIGLRNLV 427
G RNL+
Sbjct: 1600 FAGCRNLL 1607
>SB_36408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +2
Query: 167 WPDAHRQDHRGWRRFFQHFLQRDRSWQARTRAVFVDLEPTVVD 295
W D H ++ R + W A T VFV + PT D
Sbjct: 39 WHDTHSRERAAVERITYQVMNAFSKWAAVTSLVFVRVPPTSRD 81
>SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 26.6 bits (56), Expect = 9.1
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 254 TRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 403
T+ V +E TV DE G YR E ITGK + + YTI K
Sbjct: 34 TKGKTVRVECTVTDERYQGWYRMDGETENKITGKNFLTDKF----YTIDK 79
>SB_24478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 38 HLSIEKNSNQNA*VHLCTRWPSRSPDR*CLLGALLP 145
HLS E Q V+ C RW R P C + +++P
Sbjct: 466 HLSREVGRGQYGVVYACDRWAGRHP---CAIKSVVP 498
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,426,525
Number of Sequences: 59808
Number of extensions: 306726
Number of successful extensions: 867
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 859323430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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