Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1071
(441 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 130 4e-31
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 130 4e-31
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 130 4e-31
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 128 2e-30
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 112 9e-26
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 112 1e-25
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 108 2e-24
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 108 2e-24
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 107 4e-24
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 107 4e-24
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 106 8e-24
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 106 8e-24
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 102 1e-22
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 99 7e-22
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 95 2e-20
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 95 2e-20
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 64 3e-11
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 64 3e-11
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 64 3e-11
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 64 4e-11
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 64 4e-11
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 55 3e-08
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 55 3e-08
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 35 0.030
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 35 0.030
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.21
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 29 1.5
Z75550-3|CAA99929.1| 167|Caenorhabditis elegans Hypothetical pr... 27 6.0
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 130 bits (314), Expect = 4e-31
Identities = 53/63 (84%), Positives = 61/63 (96%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 249 HVP 257
HVP
Sbjct: 61 HVP 63
Score = 107 bits (258), Expect = 3e-24
Identities = 50/66 (75%), Positives = 53/66 (80%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F S + RAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 392 TIGKEI 409
TIGKEI
Sbjct: 109 TIGKEI 114
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 130 bits (314), Expect = 4e-31
Identities = 53/63 (84%), Positives = 61/63 (96%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 249 HVP 257
HVP
Sbjct: 61 HVP 63
Score = 107 bits (258), Expect = 3e-24
Identities = 50/66 (75%), Positives = 53/66 (80%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F S + RAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 392 TIGKEI 409
TIGKEI
Sbjct: 109 TIGKEI 114
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 130 bits (314), Expect = 4e-31
Identities = 53/63 (84%), Positives = 61/63 (96%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 249 HVP 257
HVP
Sbjct: 61 HVP 63
Score = 107 bits (258), Expect = 3e-24
Identities = 50/66 (75%), Positives = 53/66 (80%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F S + RAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 392 TIGKEI 409
TIGKEI
Sbjct: 109 TIGKEI 114
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 128 bits (309), Expect = 2e-30
Identities = 52/62 (83%), Positives = 60/62 (96%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 252 VP 257
VP
Sbjct: 61 VP 62
Score = 107 bits (258), Expect = 3e-24
Identities = 50/66 (75%), Positives = 53/66 (80%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F S + RAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 107
Query: 392 TIGKEI 409
TIGKEI
Sbjct: 108 TIGKEI 113
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 112 bits (270), Expect = 9e-26
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +3
Query: 66 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 245
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 246 KHVP 257
KHVP
Sbjct: 65 KHVP 68
Score = 101 bits (243), Expect = 2e-22
Identities = 45/66 (68%), Positives = 52/66 (78%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F + + RA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHY
Sbjct: 54 FNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHY 113
Query: 392 TIGKEI 409
TIGKEI
Sbjct: 114 TIGKEI 119
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 112 bits (269), Expect = 1e-25
Identities = 47/63 (74%), Positives = 53/63 (84%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 249 HVP 257
HVP
Sbjct: 61 HVP 63
Score = 104 bits (250), Expect = 2e-23
Identities = 47/66 (71%), Positives = 54/66 (81%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
+ F S + RA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHY
Sbjct: 49 YNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHY 108
Query: 392 TIGKEI 409
TIGKE+
Sbjct: 109 TIGKEL 114
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 108 bits (260), Expect = 2e-24
Identities = 48/63 (76%), Positives = 54/63 (85%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
Score = 105 bits (251), Expect = 2e-23
Identities = 46/66 (69%), Positives = 55/66 (83%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F S + R++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 392 TIGKEI 409
T+GKE+
Sbjct: 107 TVGKEL 112
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 108 bits (260), Expect = 2e-24
Identities = 48/63 (76%), Positives = 54/63 (85%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
Score = 105 bits (251), Expect = 2e-23
Identities = 46/66 (69%), Positives = 55/66 (83%)
Frame = +2
Query: 212 FQHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 391
F F S + R++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 392 TIGKEI 409
T+GKE+
Sbjct: 107 TVGKEL 112
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 107 bits (257), Expect = 4e-24
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
Score = 104 bits (250), Expect = 2e-23
Identities = 43/51 (84%), Positives = 51/51 (100%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
R++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE+
Sbjct: 62 RSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 107 bits (257), Expect = 4e-24
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
Score = 104 bits (250), Expect = 2e-23
Identities = 43/51 (84%), Positives = 51/51 (100%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
R++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE+
Sbjct: 62 RSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 106 bits (254), Expect = 8e-24
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
Score = 102 bits (245), Expect = 1e-22
Identities = 42/51 (82%), Positives = 50/51 (98%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
R++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE+
Sbjct: 62 RSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 106 bits (254), Expect = 8e-24
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
Score = 102 bits (245), Expect = 1e-22
Identities = 42/51 (82%), Positives = 50/51 (98%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
R++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE+
Sbjct: 62 RSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 102 bits (245), Expect = 1e-22
Identities = 42/51 (82%), Positives = 50/51 (98%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
R++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI
Sbjct: 61 RSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEI 111
Score = 95.9 bits (228), Expect = 1e-20
Identities = 44/63 (69%), Positives = 47/63 (74%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 249 HVP 257
HVP
Sbjct: 58 HVP 60
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 99 bits (238), Expect = 7e-22
Identities = 43/62 (69%), Positives = 48/62 (77%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 252 VP 257
VP
Sbjct: 68 VP 69
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/51 (82%), Positives = 47/51 (92%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
R +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E+
Sbjct: 70 RCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREM 120
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/65 (63%), Positives = 50/65 (76%)
Frame = +2
Query: 215 QHFLQRDRSWQARTRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 394
Q F + + RA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Query: 395 IGKEI 409
IGKE+
Sbjct: 113 IGKEL 117
Score = 81.4 bits (192), Expect = 3e-16
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 252 VP 257
VP
Sbjct: 65 VP 66
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/51 (82%), Positives = 47/51 (92%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
R +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E+
Sbjct: 42 RCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREM 92
Score = 56.0 bits (129), Expect = 1e-08
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = +3
Query: 135 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 257
++CLEHGIQPDG D T ++ NTFF+ET GKHVP
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVP 41
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 64.5 bits (150), Expect = 3e-11
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 52.8 bits (121), Expect = 1e-07
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 64.5 bits (150), Expect = 3e-11
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 54.0 bits (124), Expect = 5e-08
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 64.5 bits (150), Expect = 3e-11
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 52.4 bits (120), Expect = 1e-07
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 64.1 bits (149), Expect = 4e-11
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAEL 112
Score = 54.4 bits (125), Expect = 3e-08
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 64.1 bits (149), Expect = 4e-11
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAEL 112
Score = 54.4 bits (125), Expect = 3e-08
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 62.1 bits (144), Expect = 2e-10
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 62 RACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 50.0 bits (114), Expect = 7e-07
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 54.8 bits (126), Expect = 3e-08
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EI
Sbjct: 62 RAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEI 112
Score = 48.0 bits (109), Expect = 3e-06
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 54.8 bits (126), Expect = 3e-08
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +2
Query: 257 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 409
RA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EI
Sbjct: 62 RAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEI 112
Score = 48.0 bits (109), Expect = 3e-06
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 249 HVP 257
+VP
Sbjct: 59 YVP 61
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 34.7 bits (76), Expect = 0.030
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 81 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 173
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
Score = 31.5 bits (68), Expect = 0.28
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 257 RAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEI 409
RAV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+
Sbjct: 64 RAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEV 116
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 34.7 bits (76), Expect = 0.030
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 81 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 173
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
Score = 31.5 bits (68), Expect = 0.28
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 257 RAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEI 409
RAV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+
Sbjct: 64 RAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEV 116
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.21
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 97 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 252
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 358 FLTSNKLFWMKQLSVCASADLINNSRFKIDEDSTGT 251
FL K F K ++VC S LI R+ DED + T
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDEDISKT 267
>Z75550-3|CAA99929.1| 167|Caenorhabditis elegans Hypothetical
protein T22C1.5 protein.
Length = 167
Score = 27.1 bits (57), Expect = 6.0
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 295 INNSRFKIDEDSTGTCLPAPVSLKKVLKE 209
+N SRFKID+ +T C A + KK+L++
Sbjct: 61 MNQSRFKIDDTTTSLCDHA-IERKKLLEK 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,495,233
Number of Sequences: 27780
Number of extensions: 223425
Number of successful extensions: 615
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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