Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1070
         (471 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   5.0  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   5.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.8  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 126  VIRN*EKIFLDKDKAYYSVQE 64
            V  N EKI + ++KAY  V+E
Sbjct: 1529 VFVNGEKIVVSRNKAYQKVEE 1549


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -3

Query: 376 FFCSSRPLDGVNGAAKTVVQWK 311
           FFC  RP+  V  +      WK
Sbjct: 135 FFCEVRPIKRVKDSTNCNCGWK 156


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 302 KCPFPLYNGFRGAVNAI 352
           KCP+P Y  + G +  +
Sbjct: 634 KCPYPSYYSYIGVLTLV 650


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +2

Query: 398  WQPKPKTVIKGPIMG 442
            WQP P T   G I G
Sbjct: 1132 WQPPPNTHSNGIIQG 1146


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +2

Query: 398  WQPKPKTVIKGPIMG 442
            WQP P T   G I G
Sbjct: 1128 WQPPPNTHSNGIIQG 1142


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 398  WQPKPKTVIKGPIMGRGLGKKI 463
            W+P P+    G I+G  +G ++
Sbjct: 997  WKPPPREDWNGEILGYYVGYRL 1018


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,959
Number of Sequences: 438
Number of extensions: 2997
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)