Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1069
         (434 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin ...   113   7e-26
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...   100   5e-22
AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical...    39   0.001
Z81070-10|CAB03004.1|  163|Caenorhabditis elegans Hypothetical p...    29   1.5  
AL132860-19|CAB60502.1|  159|Caenorhabditis elegans Hypothetical...    27   5.9  

>U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin
           protein 2 protein.
          Length = 195

 Score =  113 bits (271), Expect = 7e-26
 Identities = 51/64 (79%), Positives = 57/64 (89%)
 Frame = +3

Query: 63  KPAPQFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIG 242
           KPAPQFK  AVV+GEF D+SLSDYKGKYVVLFFYPLDFTFVCPTEIIAFS++A+EF+ I 
Sbjct: 8   KPAPQFKTQAVVDGEFVDVSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAEEFKAIN 67

Query: 243 CEVL 254
             VL
Sbjct: 68  TVVL 71



 Score = 83.4 bits (197), Expect = 6e-17
 Identities = 36/50 (72%), Positives = 43/50 (86%)
 Frame = +2

Query: 257 ASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGI 406
           ASTDS F+HLAWIN PRK GGLG MNIP+++D +H+ISRDYGVL E+ GI
Sbjct: 73  ASTDSVFSHLAWINQPRKHGGLGEMNIPVLADTNHQISRDYGVLKEDEGI 122


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score =  100 bits (239), Expect = 5e-22
 Identities = 44/69 (63%), Positives = 55/69 (79%)
 Frame = +3

Query: 48  PLQMTKPAPQFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADE 227
           PL      P FK TAVV+G+FK IS  DYKGK++V+FFYPLDFTFVCPTEIIA+ ++A+E
Sbjct: 32  PLGPKNTVPAFKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEIIAYGDRANE 91

Query: 228 FRKIGCEVL 254
           FR +G EV+
Sbjct: 92  FRSLGAEVV 100



 Score = 77.8 bits (183), Expect = 3e-15
 Identities = 35/70 (50%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
 Frame = +2

Query: 206 VLGEGGRVPQDRLRGARA---STDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRD 376
           ++  G R  + R  GA     S DSHF+HLAW+NTPRK GGLG M+IPL++D + +I+  
Sbjct: 82  IIAYGDRANEFRSLGAEVVACSCDSHFSHLAWVNTPRKDGGLGDMDIPLLADFNKKIADS 141

Query: 377 YGVLDEETGI 406
           +GVLD+E+G+
Sbjct: 142 FGVLDKESGL 151


>AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.11 protein.
          Length = 231

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
 Frame = +3

Query: 111 KDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVL 254
           K+ +L +Y G+ +++LF +P DFT VC TE+    + A EFRK   ++L
Sbjct: 18  KNQTLHNYIGEQWLMLFSHPADFTPVCTTELAELVKLAPEFRKRHVQIL 66


>Z81070-10|CAB03004.1|  163|Caenorhabditis elegans Hypothetical
           protein F26E4.12 protein.
          Length = 163

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +3

Query: 93  VVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVL 254
           V N    D+SLSDYKGK V++         +         E  D ++K G EVL
Sbjct: 9   VKNANGDDVSLSDYKGK-VLIIVNVASQCGLTNKNYTQLKELLDVYKKDGLEVL 61


>AL132860-19|CAB60502.1|  159|Caenorhabditis elegans Hypothetical
           protein Y56A3A.21 protein.
          Length = 159

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 9   FVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGEFKDISLSDYKGKYVV 152
           F +Y   F   +  LQ +      + TA VNG    +S+SD   K+ V
Sbjct: 35  FFHYKTTF-ITEFTLQCSNNPKNIQYTAEVNGRLIPVSISDETAKFQV 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,209,995
Number of Sequences: 27780
Number of extensions: 144412
Number of successful extensions: 477
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)