Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1069
         (434 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    25   0.48 
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    23   1.5  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    23   1.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.0  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    22   2.6  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   2.6  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           22   3.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   4.5  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 422 LREKGECPSPRPALRSRGRCGETCRLSEECSW 327
           L+  G  P P P+   RGRC    ++S    W
Sbjct: 38  LQYPGCVPKPIPSYACRGRCSSYLQVSGSKIW 69


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 413 KGECPSPRPALRSRGRCGETC 351
           +G+CPS     R  GRC   C
Sbjct: 34  RGKCPSNEIFSRCDGRCQRFC 54


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 413 KGECPSPRPALRSRGRCGETC 351
           +G+CPS     R  GRC   C
Sbjct: 34  RGKCPSNEIFSRCDGRCQRFC 54


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 87   TAVVNGEFKDISLSDY 134
            T +++  FKD+ LSD+
Sbjct: 1401 TPIMDAHFKDVKLSDF 1416


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 147 VVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVL 254
           V +   P++  F  P E     E+AD  R++ C++L
Sbjct: 15  VAIMAAPVEDEFE-PLEHFENEERADRHRRVTCDLL 49


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 147 VVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVL 254
           V +   P++  F  P E     E+AD  R++ C++L
Sbjct: 15  VAIMAAPVEDEFE-PLEHFENEERADRHRRVTCDLL 49


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 189 PTEIIAFSEKADEFRKIGCEVL 254
           P E     E+AD  R++ C++L
Sbjct: 3   PLEHFENEERADRHRRVTCDLL 24


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 91  AVALNWGAGLVICR 50
           A+ ++W AG V+CR
Sbjct: 99  AITVSWKAGDVMCR 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,499
Number of Sequences: 438
Number of extensions: 1635
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)