Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1069
(434 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 87 4e-18
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 87 6e-18
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 51 3e-07
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 38 0.002
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 32 0.19
At1g80910.1 68414.m09493 expressed protein 29 1.4
At3g62170.1 68416.m06985 pectinesterase family protein contains ... 28 2.4
At4g28395.1 68417.m04064 lipid transfer protein, putative identi... 28 3.1
At1g16020.2 68414.m01922 expressed protein 27 5.5
At1g16020.1 68414.m01921 expressed protein 27 5.5
At3g54990.1 68416.m06102 AP2 domain-containing transcription fac... 27 7.2
At3g08950.1 68416.m01045 electron transport SCO1/SenC family pro... 27 7.2
At5g13750.2 68418.m01601 transporter-related 26 9.5
At5g13750.1 68418.m01600 transporter-related 26 9.5
At4g35080.2 68417.m04981 high-affinity nickel-transport family p... 26 9.5
At4g35080.1 68417.m04980 high-affinity nickel-transport family p... 26 9.5
At4g16146.1 68417.m02449 expressed protein 26 9.5
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 87.4 bits (207), Expect = 4e-18
Identities = 44/71 (61%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 221
+PL K AP F+A AV + EF + LSDY GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 72 LPLVGNK-APDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRH 130
Query: 222 DEFRKIGCEVL 254
EF K+ EVL
Sbjct: 131 SEFEKLNTEVL 141
Score = 64.9 bits (151), Expect = 2e-11
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = +2
Query: 260 STDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPLFPGGLF 430
S DS F+HLAW+ T RK GGLG +N PLISD + IS+ +GVL + GI L GLF
Sbjct: 144 SVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQGIAL--RGLF 198
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 86.6 bits (205), Expect = 6e-18
Identities = 43/71 (60%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 MPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKA 221
+PL K AP F+A AV + EF + LS+Y GK YV+LFFYPLDFTFVCPTEI AFS++
Sbjct: 79 LPLVGNK-APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRY 137
Query: 222 DEFRKIGCEVL 254
+EF K+ EVL
Sbjct: 138 EEFEKLNTEVL 148
Score = 63.7 bits (148), Expect = 5e-11
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = +2
Query: 260 STDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPLFPGGLF 430
S DS F+HLAW+ T RK GGLG +N PL+SD + IS+ +GVL + GI L GLF
Sbjct: 151 SVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQGIAL--RGLF 205
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 51.2 bits (117), Expect = 3e-07
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +3
Query: 111 KDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVL 254
K +SL YKGK VVL+FYP D T C + AF + ++F+K G EV+
Sbjct: 86 KPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVI 133
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 LSDY-KGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVL 254
L DY + VLF +P DFT VC TE+ A ++ A EF K G ++L
Sbjct: 24 LHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLL 68
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 31.9 bits (69), Expect = 0.19
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 96 VNGEFKDISLSD-YKGKYVVLFFYPLDFTFVCPTE-IIAFSEKADEFRKIGCE 248
V+ +F LSD +KGK VV+F P +T VC + + ++ D+F+ G +
Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGID 110
>At1g80910.1 68414.m09493 expressed protein
Length = 497
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Frame = +3
Query: 114 DISLSDYKGKYV--VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVL 254
D+ ++G+ + +LFFYP D TF +I SE F ++ CEV+
Sbjct: 19 DLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFTRLFSPEAACEVI 72
>At3g62170.1 68416.m06985 pectinesterase family protein contains
Pfam profiles: PF01095 pectinesterase, PF04043 plant
invertase/pectin methylesterase inhibitor ;similar to
pollen-specific pectin esterase GI:1620652 from
[Brassica rapa subsp. pekinensis]
Length = 588
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 149 NIFPLVVRQRNVLELSVDDGRGLELGSGFGHLQRHLVETKD 27
+IF VV + + VDD + + +G+G G R L+E D
Sbjct: 192 DIFHSVVTAMAQMGVKVDDMKNITMGAGAGGAARRLLEDND 232
>At4g28395.1 68417.m04064 lipid transfer protein, putative identical
to anther-specific gene ATA7 [gi:2746339]; contains Pfam
protease inhibitor/seed storage/LTP family domain
Length = 180
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 354 LSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAR 253
+ + G+F PSP C RGV VK S +R
Sbjct: 80 MGFVEGIFQQPSPDCCRGVTHLNNVVKFTSPGSR 113
>At1g16020.2 68414.m01922 expressed protein
Length = 502
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +3
Query: 150 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVL 254
+LFFYP D F +I SE F ++ CEV+
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVI 70
>At1g16020.1 68414.m01921 expressed protein
Length = 515
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = +3
Query: 150 VLFFYPLDFTFVCPTEIIAFSEKADEFRKI-----GCEVL 254
+LFFYP D F +I SE F ++ CEV+
Sbjct: 31 ILFFYPADLDFSTQLSVIGLSEGLITFTRLFSPEAACEVI 70
>At3g54990.1 68416.m06102 AP2 domain-containing transcription
factor, putative similar to (SP:P47927) Floral homeotic
protein APETALA2, Arabidopsis thaliana, U12546
Length = 247
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 161 EEQHNIFPLVVRQRNVLELSVDDGRGLELGS 69
+E ++FP+V R +E SV+D L L S
Sbjct: 70 KETGDLFPVVADARRNIEFSVEDSHWLNLSS 100
>At3g08950.1 68416.m01045 electron transport SCO1/SenC family
protein similar to SP|P23833 SCO1 protein, mitochondrial
precursor {Saccharomyces cerevisiae}; contains Pfam
profile PF02630: SCO1/SenC
Length = 334
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/49 (20%), Positives = 26/49 (53%)
Frame = +3
Query: 90 AVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRK 236
+++ + K ++ + GK+ +L+F +CP E+I + D+ ++
Sbjct: 178 SLIRDDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKE 226
>At5g13750.2 68418.m01601 transporter-related
Length = 392
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 290 WINTPRKQGGLG 325
W N+PRK GGLG
Sbjct: 214 WANSPRKYGGLG 225
>At5g13750.1 68418.m01600 transporter-related
Length = 478
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 290 WINTPRKQGGLG 325
W N+PRK GGLG
Sbjct: 300 WANSPRKYGGLG 311
>At4g35080.2 68417.m04981 high-affinity nickel-transport family
protein contains Pfam domain, PF03824: High-affinity
nickel-transport protein
Length = 336
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +1
Query: 352 QVSPHLPRLRSAGRG--DGHSPFSRR 423
+ SP LPRLRS+G H P SRR
Sbjct: 22 RTSPFLPRLRSSGLSFVSTHRPESRR 47
>At4g35080.1 68417.m04980 high-affinity nickel-transport family
protein contains Pfam domain, PF03824: High-affinity
nickel-transport protein
Length = 365
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +1
Query: 352 QVSPHLPRLRSAGRG--DGHSPFSRR 423
+ SP LPRLRS+G H P SRR
Sbjct: 22 RTSPFLPRLRSSGLSFVSTHRPESRR 47
>At4g16146.1 68417.m02449 expressed protein
Length = 102
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +2
Query: 308 KQGGLGPMNIPLISDKSHRI---SRDYGVLDEETGI 406
K GGL P PLIS S R S D+ +L +E I
Sbjct: 25 KYGGLVPKKKPLISKDSKRAFFDSADWALLKQEASI 60
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,899,779
Number of Sequences: 28952
Number of extensions: 137659
Number of successful extensions: 469
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 683042040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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