Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1067
(428 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 25 0.23
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 23 0.93
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 22 2.8
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 22 2.8
DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory pro... 21 5.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 6.6
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 6.6
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 21 6.6
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 20 8.7
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 20 8.7
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 20 8.7
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 25.4 bits (53), Expect = 0.23
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 90 CQIRSSSHAFQNPLFCRDSLATCKT 164
CQ+ +S + FQN LF + + C T
Sbjct: 225 CQVANSIYGFQNFLFVLSTFSICIT 249
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 23.4 bits (48), Expect = 0.93
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -2
Query: 112 CEEERIWHLFYDY 74
C+ WH FYDY
Sbjct: 481 CDPYTPWHTFYDY 493
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 21.8 bits (44), Expect = 2.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 133 SVEIL*LRARPGQTLPELTSKNPPKDQRITNSKYTSRSVSNV 258
S+++ R T TSK P D+RIT S + +NV
Sbjct: 29 SIDLSTFRVPTYGTTSHPTSKLVPPDERITYSWTEINAFANV 70
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 21.8 bits (44), Expect = 2.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 133 SVEIL*LRARPGQTLPELTSKNPPKDQRITNSKYTSRSVSNV 258
S+++ R T TSK P D+RIT S + +NV
Sbjct: 29 SIDLSTFRVPTYGTTSHPTSKLVPPDERITYSWTEINAFANV 70
>DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory
protein 15 protein.
Length = 146
Score = 21.0 bits (42), Expect = 5.0
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 403 PSHCRQLEHHHDTQFKP 353
P H +L+H H ++F P
Sbjct: 105 PHHEIKLQHLHQSKFNP 121
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +2
Query: 92 PDSLFFTCVSKSLVLS 139
P SLFF C++ +++
Sbjct: 976 PSSLFFFCMAAEFIIA 991
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +2
Query: 92 PDSLFFTCVSKSLVLS 139
P SLFF C++ +++
Sbjct: 976 PSSLFFFCMAAEFIIA 991
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/24 (25%), Positives = 15/24 (62%)
Frame = +3
Query: 258 YVRFHFFAHLRHYKRCFGS*RGFK 329
++++HFF L+ + + F + G +
Sbjct: 86 FMKYHFFGTLKLWSQLFSTFAGIE 109
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -3
Query: 273 NETLHNIGD*SRRIFGIC 220
++TLHNI + ++ IC
Sbjct: 15 HDTLHNIYTSMKPVYAIC 32
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -3
Query: 273 NETLHNIGD*SRRIFGIC 220
++TLHNI + ++ IC
Sbjct: 15 HDTLHNIYTSMKPVYAIC 32
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 20.2 bits (40), Expect = 8.7
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 300 RCFGS*RGFKANTCPNETGLNCV 368
RC G +N C N L+CV
Sbjct: 294 RCEGDINECLSNPCSNAGTLDCV 316
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,901
Number of Sequences: 336
Number of extensions: 1892
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9460170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -