Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1067
         (428 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    27   0.28 
U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...    23   4.6  
CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    23   4.6  

>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 27.1 bits (57), Expect = 0.28
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +2

Query: 32  HREATSSGFVS-FSRVVIKKMPDSLFFTCVSKSLVLSRFS-SYVQDL 166
           +R  T    V  F +V     P ++FFTC+   ++ +RF+ ++V D+
Sbjct: 11  YRHTTREQMVQEFRKVRDNPQPKAVFFTCMDSRMIPTRFTETHVGDM 57


>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 369 IHSLSRFRLDKYLL*NLFNYQSSVCSALDA 280
           IH L+R+   K +L   + Y+SS  SAL A
Sbjct: 122 IHRLARYYKIKAVLPPNWKYESSTASALVA 151


>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +2

Query: 227 PNIRLDQSPMLCKVSFFCASKALQTLL 307
           P  R+ + P++C ++ +C +  L+  L
Sbjct: 133 PTRRMIRKPLVCAITGYCVAGGLELAL 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,088
Number of Sequences: 2352
Number of extensions: 7717
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)