Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1066
(522 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 25 0.41
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 24 0.71
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 1.2
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 23 1.2
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 23 1.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 2.2
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 22 3.8
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 22 3.8
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 22 3.8
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 21 8.7
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 21 8.7
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 25.0 bits (52), Expect = 0.41
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 404 CVESKVWFGKPLCWMPM-KESVSVVYPSLSANKAKPAQG 517
CV K GKP CW K + ++ ++ +PA G
Sbjct: 873 CVTCKCENGKPTCWRECDKATCEKLFRMKKSSALRPASG 911
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 24.2 bits (50), Expect = 0.71
Identities = 14/63 (22%), Positives = 26/63 (41%)
Frame = -2
Query: 419 PLIPRMPPYIISTVTSPTLVEPCFFRNSRIFSCSLGIFSWRILFKFVCSALRPRSELSQS 240
P +P++PP + + PT++ P S + + R + F C L + L +
Sbjct: 175 PPLPQVPPLPLPPIFPPTMINPSAICESAAQLIFMNVQWVRSIPAFTCLPLSDQLLLLEE 234
Query: 239 DML 231
L
Sbjct: 235 SWL 237
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 23.4 bits (48), Expect = 1.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 163 FALGGFKNGSIQDHIFKTRRIAESMSDCDSSLRGLSAEQTNLKSILQEKIPK 318
F L + GS I K R + + + D D SLR L++ ++ + +PK
Sbjct: 49 FVLDPWFAGSSNVGINKWRFLLQCLEDLDRSLRKLNSRLFVIRGQPADALPK 100
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 23.4 bits (48), Expect = 1.2
Identities = 13/61 (21%), Positives = 26/61 (42%)
Frame = -2
Query: 413 IPRMPPYIISTVTSPTLVEPCFFRNSRIFSCSLGIFSWRILFKFVCSALRPRSELSQSDM 234
+P++PP + + +PT++ P S + + R + F C L + L +
Sbjct: 177 LPQVPPLPLPPIFAPTMINPSAICESAAQLLFMNVQWVRSIPAFTCLPLSDQLLLLEESW 236
Query: 233 L 231
L
Sbjct: 237 L 237
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 23.0 bits (47), Expect = 1.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 295 ILQEKIPKEQEKIREFRKKHG 357
+L EK+ KE ++R F +K+G
Sbjct: 262 LLCEKVAKEDIQVRFFEEKNG 282
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.6 bits (46), Expect = 2.2
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Frame = -2
Query: 449 ASSTEVSQTRPLIPRMPPYI-----ISTVTSPTLVEPCFFRN 339
ASST T P++P P I T TS C+F N
Sbjct: 2288 ASSTMAPSTTPMVPDKPVTTTTSRPIGTDTSDDYKVVCYFTN 2329
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 21.8 bits (44), Expect = 3.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 311 IFSWRILFKFVCSALRPRSELSQSDMLSAILR 216
IFSW I + V + RS +S +LR
Sbjct: 131 IFSWEIRDRLVKEGICDRSTAPSVSAISRLLR 162
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 422 RPLIPRMPPYIISTVTSPTLVE 357
+P +P++PP T +S + +E
Sbjct: 208 KPTVPKIPPAEFPTTSSSSALE 229
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 422 RPLIPRMPPYIISTVTSPTLVE 357
+P +P++PP T +S + +E
Sbjct: 208 KPTVPKIPPAEFPTTSSSSALE 229
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -2
Query: 356 PCFFRNSRIFSCSLGIFSWRI 294
P F N + + SL + SW +
Sbjct: 168 PIIFHNLTLITYSLCVISWAV 188
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -2
Query: 356 PCFFRNSRIFSCSLGIFSWRI 294
P F N + + SL + SW +
Sbjct: 168 PIIFHNLTLITYSLCVISWAV 188
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,238
Number of Sequences: 336
Number of extensions: 2290
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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