Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1066
(522 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC072016-1|AAH72016.1| 466|Homo sapiens citrate synthase protein. 125 1e-28
BC010106-1|AAH10106.1| 466|Homo sapiens CS protein protein. 125 1e-28
AK074956-1|BAC11314.1| 466|Homo sapiens protein ( Homo sapiens ... 125 1e-28
AF053631-1|AAQ13428.1| 466|Homo sapiens citrate synthase protein. 125 1e-28
AF047042-1|AAC25560.1| 466|Homo sapiens citrate synthase protein. 125 1e-28
BC000105-1|AAH00105.3| 409|Homo sapiens CS protein protein. 87 5e-17
M34192-1|AAA52711.1| 423|Homo sapiens IVD protein. 33 0.46
BT007145-1|AAP35809.1| 423|Homo sapiens isovaleryl Coenzyme A d... 33 0.46
BC017202-1|AAH17202.1| 423|Homo sapiens isovaleryl Coenzyme A d... 33 0.46
AF191218-1|AAF20182.1| 423|Homo sapiens isovaleryl dehydrogenas... 33 0.46
AK095003-1|BAC04472.1| 369|Homo sapiens protein ( Homo sapiens ... 31 1.9
BC043277-1|AAH43277.1| 839|Homo sapiens SYNJ2 protein protein. 29 7.5
AY152396-1|AAN73051.1| 1288|Homo sapiens synaptojanin 2A protein. 29 7.5
AL606469-1|CAI13710.1| 296|Homo sapiens novel protein protein. 29 7.5
AL592296-1|CAI16750.1| 296|Homo sapiens novel protein protein. 29 7.5
AL139330-4|CAI12983.1| 1496|Homo sapiens synaptojanin 2 protein. 29 7.5
AL139330-1|CAI12978.1| 581|Homo sapiens synaptojanin 2 protein. 29 7.5
AF318616-1|AAG46036.1| 1496|Homo sapiens synaptojanin 2 protein. 29 7.5
AF039945-1|AAD02178.1| 1443|Homo sapiens synaptojanin 2B protein. 29 7.5
AB002346-1|BAA20805.2| 1443|Homo sapiens KIAA0348 protein protein. 29 7.5
>BC072016-1|AAH72016.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 125 bits (301), Expect = 1e-28
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = +1
Query: 259 RGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETS 438
R SA TNLK IL + IPKEQ +I+ FR++HG T VG++TVDMMYGGMRG+KGLV+ETS
Sbjct: 24 RHASASSTNLKDILADLIPKEQARIKTFRQQHGKTVVGQITVDMMYGGMRGMKGLVYETS 83
Query: 439 VLDADEGIRFRGLSIPECQQ 498
VLD DEGIRFRG SIPECQ+
Sbjct: 84 VLDPDEGIRFRGFSIPECQK 103
>BC010106-1|AAH10106.1| 466|Homo sapiens CS protein protein.
Length = 466
Score = 125 bits (301), Expect = 1e-28
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = +1
Query: 259 RGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETS 438
R SA TNLK IL + IPKEQ +I+ FR++HG T VG++TVDMMYGGMRG+KGLV+ETS
Sbjct: 24 RHASASSTNLKDILADLIPKEQARIKTFRQQHGKTVVGQITVDMMYGGMRGMKGLVYETS 83
Query: 439 VLDADEGIRFRGLSIPECQQ 498
VLD DEGIRFRG SIPECQ+
Sbjct: 84 VLDPDEGIRFRGFSIPECQK 103
>AK074956-1|BAC11314.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ90475 fis, clone NT2RP3002721, highly similar to
Porcine citrate synthase mRNA. ).
Length = 466
Score = 125 bits (301), Expect = 1e-28
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = +1
Query: 259 RGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETS 438
R SA TNLK IL + IPKEQ +I+ FR++HG T VG++TVDMMYGGMRG+KGLV+ETS
Sbjct: 24 RHASASSTNLKDILADLIPKEQARIKTFRQQHGKTVVGQITVDMMYGGMRGMKGLVYETS 83
Query: 439 VLDADEGIRFRGLSIPECQQ 498
VLD DEGIRFRG SIPECQ+
Sbjct: 84 VLDPDEGIRFRGFSIPECQK 103
>AF053631-1|AAQ13428.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 125 bits (301), Expect = 1e-28
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = +1
Query: 259 RGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETS 438
R SA TNLK IL + IPKEQ +I+ FR++HG T VG++TVDMMYGGMRG+KGLV+ETS
Sbjct: 24 RHASASSTNLKDILADLIPKEQARIKTFRQQHGKTVVGQITVDMMYGGMRGMKGLVYETS 83
Query: 439 VLDADEGIRFRGLSIPECQQ 498
VLD DEGIRFRG SIPECQ+
Sbjct: 84 VLDPDEGIRFRGFSIPECQK 103
>AF047042-1|AAC25560.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 125 bits (301), Expect = 1e-28
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = +1
Query: 259 RGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETS 438
R SA TNLK IL + IPKEQ +I+ FR++HG T VG++TVDMMYGGMRG+KGLV+ETS
Sbjct: 24 RHASASSTNLKDILADLIPKEQARIKTFRQQHGKTVVGQITVDMMYGGMRGMKGLVYETS 83
Query: 439 VLDADEGIRFRGLSIPECQQ 498
VLD DEGIRFRG SIPECQ+
Sbjct: 84 VLDPDEGIRFRGFSIPECQK 103
>BC000105-1|AAH00105.3| 409|Homo sapiens CS protein protein.
Length = 409
Score = 86.6 bits (205), Expect = 5e-17
Identities = 38/46 (82%), Positives = 43/46 (93%)
Frame = +1
Query: 361 TKVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQ 498
T VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+
Sbjct: 1 TVVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQK 46
>M34192-1|AAA52711.1| 423|Homo sapiens IVD protein.
Length = 423
Score = 33.5 bits (73), Expect = 0.46
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Frame = +1
Query: 226 AESMSDCDSSLRGLSAEQTNLKS----ILQEKI-PKEQE--------KIREFRKKHGSTK 366
A S+ D ++ GLS EQ L+ LQE + PK QE +REF K+ G+
Sbjct: 29 AHSLLPVDDAINGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLG 88
Query: 367 VGEVTVDMMYGG 402
V +T + YGG
Sbjct: 89 VLGITAPVQYGG 100
>BT007145-1|AAP35809.1| 423|Homo sapiens isovaleryl Coenzyme A
dehydrogenase protein.
Length = 423
Score = 33.5 bits (73), Expect = 0.46
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Frame = +1
Query: 226 AESMSDCDSSLRGLSAEQTNLKS----ILQEKI-PKEQE--------KIREFRKKHGSTK 366
A S+ D ++ GLS EQ L+ LQE + PK QE +REF K+ G+
Sbjct: 29 AHSLLPVDDAINGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLG 88
Query: 367 VGEVTVDMMYGG 402
V +T + YGG
Sbjct: 89 VLGITAPVQYGG 100
>BC017202-1|AAH17202.1| 423|Homo sapiens isovaleryl Coenzyme A
dehydrogenase protein.
Length = 423
Score = 33.5 bits (73), Expect = 0.46
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Frame = +1
Query: 226 AESMSDCDSSLRGLSAEQTNLKS----ILQEKI-PKEQE--------KIREFRKKHGSTK 366
A S+ D ++ GLS EQ L+ LQE + PK QE +REF K+ G+
Sbjct: 29 AHSLLPVDDAINGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLG 88
Query: 367 VGEVTVDMMYGG 402
V +T + YGG
Sbjct: 89 VLGITAPVQYGG 100
>AF191218-1|AAF20182.1| 423|Homo sapiens isovaleryl dehydrogenase
protein.
Length = 423
Score = 33.5 bits (73), Expect = 0.46
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Frame = +1
Query: 226 AESMSDCDSSLRGLSAEQTNLKS----ILQEKI-PKEQE--------KIREFRKKHGSTK 366
A S+ D ++ GLS EQ L+ LQE + PK QE +REF K+ G+
Sbjct: 29 AHSLLPVDDAINGLSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLG 88
Query: 367 VGEVTVDMMYGG 402
V +T + YGG
Sbjct: 89 VLGITAPVQYGG 100
>AK095003-1|BAC04472.1| 369|Homo sapiens protein ( Homo sapiens
cDNA FLJ37684 fis, clone BRHIP2013723, weakly similar to
Homo sapiens mRNA for paralemin. ).
Length = 369
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/68 (19%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 169 LGGFKNGSIQDHIFKTRRIAESMSDCDSSLRGLSAEQTNLKS---ILQEKIPKEQEKIRE 339
L G G+ ++ F+ +++ +++ + ++ L +E++ + + I+ EK+ + ++ ++
Sbjct: 54 LQGIPAGTAEEDEFRVKQLEDNIQRLEQEIQTLESEESQISAKEQIILEKLKETEKSFKD 113
Query: 340 FRKKHGST 363
F+K ST
Sbjct: 114 FQKGFSST 121
>BC043277-1|AAH43277.1| 839|Homo sapiens SYNJ2 protein protein.
Length = 839
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 449 ASSTEVSQTRPLIPRMPPYIISTVTSPTL 363
A+ E Q PL+PR PP + + PTL
Sbjct: 558 AAKPETPQAPPLLPRRPPPRVPAIKKPTL 586
>AY152396-1|AAN73051.1| 1288|Homo sapiens synaptojanin 2A protein.
Length = 1288
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 449 ASSTEVSQTRPLIPRMPPYIISTVTSPTL 363
A+ E Q PL+PR PP + + PTL
Sbjct: 1215 AAKPETPQAPPLLPRRPPPRVPAIKKPTL 1243
>AL606469-1|CAI13710.1| 296|Homo sapiens novel protein protein.
Length = 296
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +1
Query: 181 KNGSIQDHIFKTRRIAE----SMSDCDSSLRGLSAEQTNLKSILQEKIPKEQEKIREFRK 348
+N ++D + + +AE ++ S L E KS++Q+ I K++E +E RK
Sbjct: 230 ENSGLEDELISMKEMAEKDHKTIQKLMDSRDRLREELHYEKSLVQDVINKQKED-KEMRK 288
Query: 349 KHGSTKV 369
K+GS V
Sbjct: 289 KYGSLSV 295
>AL592296-1|CAI16750.1| 296|Homo sapiens novel protein protein.
Length = 296
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +1
Query: 181 KNGSIQDHIFKTRRIAE----SMSDCDSSLRGLSAEQTNLKSILQEKIPKEQEKIREFRK 348
+N ++D + + +AE ++ S L E KS++Q+ I K++E +E RK
Sbjct: 230 ENSGLEDELISMKEMAEKDHKTIQKLMDSRDRLREELHYEKSLVQDVINKQKED-KEMRK 288
Query: 349 KHGSTKV 369
K+GS V
Sbjct: 289 KYGSLSV 295
>AL139330-4|CAI12983.1| 1496|Homo sapiens synaptojanin 2 protein.
Length = 1496
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 449 ASSTEVSQTRPLIPRMPPYIISTVTSPTL 363
A+ E Q PL+PR PP + + PTL
Sbjct: 1215 AAKPETPQAPPLLPRRPPPRVPAIKKPTL 1243
>AL139330-1|CAI12978.1| 581|Homo sapiens synaptojanin 2 protein.
Length = 581
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 449 ASSTEVSQTRPLIPRMPPYIISTVTSPTL 363
A+ E Q PL+PR PP + + PTL
Sbjct: 300 AAKPETPQAPPLLPRRPPPRVPAIKKPTL 328
>AF318616-1|AAG46036.1| 1496|Homo sapiens synaptojanin 2 protein.
Length = 1496
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 449 ASSTEVSQTRPLIPRMPPYIISTVTSPTL 363
A+ E Q PL+PR PP + + PTL
Sbjct: 1215 AAKPETPQAPPLLPRRPPPRVPAIKKPTL 1243
>AF039945-1|AAD02178.1| 1443|Homo sapiens synaptojanin 2B protein.
Length = 1443
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 449 ASSTEVSQTRPLIPRMPPYIISTVTSPTL 363
A+ E Q PL+PR PP + + PTL
Sbjct: 1162 AAKPETPQAPPLLPRRPPPRVPAIKKPTL 1190
>AB002346-1|BAA20805.2| 1443|Homo sapiens KIAA0348 protein protein.
Length = 1443
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 449 ASSTEVSQTRPLIPRMPPYIISTVTSPTL 363
A+ E Q PL+PR PP + + PTL
Sbjct: 1162 AAKPETPQAPPLLPRRPPPRVPAIKKPTL 1190
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,520,613
Number of Sequences: 237096
Number of extensions: 1496019
Number of successful extensions: 5181
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5177
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -