Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1066
         (522 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089318-1|AAL90056.1|  522|Drosophila melanogaster AT12538p pro...   127   1e-29
AE014298-884|AAF46159.1|  464|Drosophila melanogaster CG3861-PA,...   127   1e-29
AE014298-883|AAN09169.1|  522|Drosophila melanogaster CG3861-PB,...   127   1e-29
AY058419-1|AAL13648.1|  478|Drosophila melanogaster GH19789p pro...    58   7e-09
AE014297-1450|AAF54748.2|  478|Drosophila melanogaster CG14740-P...    58   7e-09
X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    41   0.001
AE014296-2454|AAF49683.1|  602|Drosophila melanogaster CG3020-PA...    28   6.7  
BT024224-1|ABC86286.1|  923|Drosophila melanogaster LP13067p pro...    28   8.8  

>AY089318-1|AAL90056.1|  522|Drosophila melanogaster AT12538p
           protein.
          Length = 522

 Score =  127 bits (306), Expect = 1e-29
 Identities = 55/91 (60%), Positives = 76/91 (83%)
 Frame = +1

Query: 226 AESMSDCDSSLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGM 405
           A+ + +  + +R ++A+  +L+ +L  K+P+EQE+++ FRK+HG+TK+GE T+DMMYGGM
Sbjct: 72  AQKLPNVGAYVRMIAADGKSLRDVLAAKVPQEQERVKNFRKQHGATKMGETTIDMMYGGM 131

Query: 406 RGIKGLVWETSVLDADEGIRFRGLSIPECQQ 498
           RGIK LV ETSVLDADEGIRFRGLSIPECQ+
Sbjct: 132 RGIKALVTETSVLDADEGIRFRGLSIPECQK 162


>AE014298-884|AAF46159.1|  464|Drosophila melanogaster CG3861-PA,
           isoform A protein.
          Length = 464

 Score =  127 bits (306), Expect = 1e-29
 Identities = 55/91 (60%), Positives = 76/91 (83%)
 Frame = +1

Query: 226 AESMSDCDSSLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGM 405
           A+ + +  + +R ++A+  +L+ +L  K+P+EQE+++ FRK+HG+TK+GE T+DMMYGGM
Sbjct: 14  AQKLPNVGAYVRMIAADGKSLRDVLAAKVPQEQERVKNFRKQHGATKMGETTIDMMYGGM 73

Query: 406 RGIKGLVWETSVLDADEGIRFRGLSIPECQQ 498
           RGIK LV ETSVLDADEGIRFRGLSIPECQ+
Sbjct: 74  RGIKALVTETSVLDADEGIRFRGLSIPECQK 104


>AE014298-883|AAN09169.1|  522|Drosophila melanogaster CG3861-PB,
           isoform B protein.
          Length = 522

 Score =  127 bits (306), Expect = 1e-29
 Identities = 55/91 (60%), Positives = 76/91 (83%)
 Frame = +1

Query: 226 AESMSDCDSSLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGM 405
           A+ + +  + +R ++A+  +L+ +L  K+P+EQE+++ FRK+HG+TK+GE T+DMMYGGM
Sbjct: 72  AQKLPNVGAYVRMIAADGKSLRDVLAAKVPQEQERVKNFRKQHGATKMGETTIDMMYGGM 131

Query: 406 RGIKGLVWETSVLDADEGIRFRGLSIPECQQ 498
           RGIK LV ETSVLDADEGIRFRGLSIPECQ+
Sbjct: 132 RGIKALVTETSVLDADEGIRFRGLSIPECQK 162


>AY058419-1|AAL13648.1|  478|Drosophila melanogaster GH19789p
           protein.
          Length = 478

 Score = 58.0 bits (134), Expect = 7e-09
 Identities = 28/65 (43%), Positives = 43/65 (66%)
 Frame = +1

Query: 280 TNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEG 459
           + LK+ L +KIP E+EK    +  HG   +G+++V+ + GGMRG+  L  ETS LD ++G
Sbjct: 31  SGLKAKLAKKIPIEREKFLGIKCLHGKKIIGQISVNSVIGGMRGLPLLFCETSSLDKNKG 90

Query: 460 IRFRG 474
           I +RG
Sbjct: 91  IYYRG 95


>AE014297-1450|AAF54748.2|  478|Drosophila melanogaster CG14740-PA
           protein.
          Length = 478

 Score = 58.0 bits (134), Expect = 7e-09
 Identities = 28/65 (43%), Positives = 43/65 (66%)
 Frame = +1

Query: 280 TNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEG 459
           + LK+ L +KIP E+EK    +  HG   +G+++V+ + GGMRG+  L  ETS LD ++G
Sbjct: 31  SGLKAKLAKKIPIEREKFLGIKCLHGKKIIGQISVNSVIGGMRGLPLLFCETSSLDKNKG 90

Query: 460 IRFRG 474
           I +RG
Sbjct: 91  IYYRG 95


>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +1

Query: 28 AVAAALELVDPPGCRNSA 81
          AVAAALELVDPPGCRNSA
Sbjct: 5  AVAAALELVDPPGCRNSA 22


>AE014296-2454|AAF49683.1|  602|Drosophila melanogaster CG3020-PA
           protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 21/63 (33%), Positives = 26/63 (41%)
 Frame = -2

Query: 437 EVSQTRPLIPRMPPYIISTVTSPTLVEPCFFRNSRIFSCSLGIFSWRILFKFVCSALRPR 258
           E S T P  P  PP   S+VTS T         S   SC L   S  +     C  ++P 
Sbjct: 69  EGSTTPPPQPMTPPPSASSVTSTTSGIGSVSAGSVSDSCDLPTDSEEVAIAKECQPIQPA 128

Query: 257 SEL 249
           S+L
Sbjct: 129 SQL 131


>BT024224-1|ABC86286.1|  923|Drosophila melanogaster LP13067p
           protein.
          Length = 923

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -1

Query: 225 NSTSLEDVILNRAIFKAAERKLPHKSRQLARDRSHTQVTEKK 100
           +S+S+ED+  N A  +   RK   K R+ AR ++     EKK
Sbjct: 105 SSSSVEDLFANEAERRNWHRKTSEKRRRNARKKNLMHTKEKK 146


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,248,334
Number of Sequences: 53049
Number of extensions: 463134
Number of successful extensions: 1566
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)