Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1064
(475 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical pr... 32 0.18
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 30 0.74
Z68751-6|CAA92976.1| 202|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 28 3.0
U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical p... 28 3.0
U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical p... 28 3.0
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 28 3.0
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 28 3.0
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 3.9
AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical... 28 3.9
Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical pr... 27 5.2
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 27 5.2
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 27 6.9
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF039039-3|AAB94175.3| 161|Caenorhabditis elegans Hypothetical ... 27 9.1
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 27 9.1
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical
protein T12G3.2a protein.
Length = 928
Score = 32.3 bits (70), Expect = 0.18
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +2
Query: 368 HIPLSPAGVIAKRGPRHRSPPFSPNKVWPP 457
HIPL+PA + GP SPP P KV PP
Sbjct: 830 HIPLAPAPIARNMGPTMISPP--PAKVRPP 857
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 30.3 bits (65), Expect = 0.74
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -2
Query: 471 PKGGLGGQTLFGEKGGDRCRGPLFAITPAGERG 373
P+G LGG +FGEKG +GP+ A G RG
Sbjct: 320 PQGNLGGPGVFGEKGP---QGPVGAPGQKGRRG 349
>Z68751-6|CAA92976.1| 202|Caenorhabditis elegans Hypothetical
protein T05E11.8 protein.
Length = 202
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2
Query: 468 KGGLGGQTLFGEKGGDRCRGP 406
KGG GG+ FG+K GD+ RGP
Sbjct: 168 KGGKGGKH-FGKKNGDKKRGP 187
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 340 GVTQLNRLAAHPPF--ASWRNSEEGPPAPIAPFFPKQGLAAKA 462
G Q N L + P AS +NS PA I+P P+ G AA A
Sbjct: 734 GAEQYNSLNSPEPLLSASHKNSTSMRPAGISPTCPRHGRAALA 776
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 340 GVTQLNRLAAHPPF--ASWRNSEEGPPAPIAPFFPKQGLAAKA 462
G Q N L + P AS +NS PA I+P P+ G AA A
Sbjct: 734 GAEQYNSLNSPEPLLSASHKNSTSMRPAGISPTCPRHGRAALA 776
>U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical
protein F07C4.12a protein.
Length = 348
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 271 NWVPGPPRAAADRLFFFFIALVGRRAYGPP-DGEWLPSPMD 152
+W+ P ++L F + + G Y P DGE+LP P+D
Sbjct: 73 DWLRHKPIEEMEKLQGFQLPITGYFIYQPNIDGEFLPKPLD 113
>U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical
protein F07C4.12b protein.
Length = 564
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 271 NWVPGPPRAAADRLFFFFIALVGRRAYGPP-DGEWLPSPMD 152
+W+ P ++L F + + G Y P DGE+LP P+D
Sbjct: 289 DWLRHKPIEEMEKLQGFQLPITGYFIYQPNIDGEFLPKPLD 329
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 340 GVTQLNRLAAHPPF--ASWRNSEEGPPAPIAPFFPKQGLAAKA 462
G Q N L + P AS +NS PA I+P P+ G AA A
Sbjct: 734 GAEQYNSLNSPEPLLSASHKNSTSMRPAGISPTCPRHGRAALA 776
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 340 GVTQLNRLAAHPPF--ASWRNSEEGPPAPIAPFFPKQGLAAKA 462
G Q N L + P AS +NS PA I+P P+ G AA A
Sbjct: 734 GAEQYNSLNSPEPLLSASHKNSTSMRPAGISPTCPRHGRAALA 776
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 374 PLSPAGVIAKRGPRHRSPPFSPNKVWPPRPP 466
P P G GP SP +P PP PP
Sbjct: 227 PAGPPGPAGPPGPDGASPTAAPGAAGPPGPP 257
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 374 PLSPAGVIAKRGPRHRSPPFSPNKVWPPRPP 466
P P G GP SP +P PP PP
Sbjct: 226 PAGPPGPAGPPGPDGASPTAAPGAAGPPGPP 256
>AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical
protein Y38H6C.14 protein.
Length = 814
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = -1
Query: 145 NARGRAKPLPTA*YSPQASF--EEGHVIALRK 56
N + RAKP+P + Y P +F E+ +V A+RK
Sbjct: 402 NTKFRAKPVPKSTYQPTNTFATEQKYVEAMRK 433
>Z68752-3|CAE54905.1| 888|Caenorhabditis elegans Hypothetical
protein T12G3.2c protein.
Length = 888
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 368 HIPLSPAGVIAKRGPRHRSPP 430
HIPL+PA + GP SPP
Sbjct: 830 HIPLAPAPIARNMGPTMISPP 850
>Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical
protein T12G3.2b protein.
Length = 912
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 368 HIPLSPAGVIAKRGPRHRSPP 430
HIPL+PA + GP SPP
Sbjct: 830 HIPLAPAPIARNMGPTMISPP 850
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 405 GAPGTDRPLFPQTRFGRQGPP 467
G G D P P+ R G+QGPP
Sbjct: 257 GPAGPDGPQGPEGRSGKQGPP 277
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 27.1 bits (57), Expect = 6.9
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = -2
Query: 465 GGLGGQTL---FGEKG-GDRCRGPLFAITPAGERG 373
GGLGG+ FG G GDR +GP F G RG
Sbjct: 587 GGLGGRGQGPDFGPGGQGDRGQGPDFGARSQGNRG 621
>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical
protein K07G5.3 protein.
Length = 1202
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 159 GDGNHSPSGGPYARLPTRAIKKKNKRSA 242
GDG SPS GP+ + KK+N+R +
Sbjct: 43 GDGEQSPSPGPFTK--DEKDKKQNRRES 68
>AF039039-3|AAB94175.3| 161|Caenorhabditis elegans Hypothetical
protein T08B1.4 protein.
Length = 161
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 2 RSFLPRTIRLWNELPSMVFPERYDMSFFKRGLWRV 106
R FL + LW E+ ++ R+ +SFFK+ L+R+
Sbjct: 123 RYFLNAHLVLWPEIEKVITNPRWAVSFFKK-LFRI 156
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 410 PRHRSPPFSPNKVWPPRPPL 469
PR + P SP PPRPP+
Sbjct: 8 PRTKFEPSSPEPTLPPRPPV 27
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 410 PRHRSPPFSPNKVWPPRPPL 469
PR + P SP PPRPP+
Sbjct: 8 PRTKFEPSSPEPTLPPRPPV 27
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,522,146
Number of Sequences: 27780
Number of extensions: 340475
Number of successful extensions: 1217
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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