BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1064
(475 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 26 0.24
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 25 0.41
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 1.7
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 2.9
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 2.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 2.9
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 3.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 3.8
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 3.8
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 3.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 3.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 3.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 3.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 3.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 3.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 3.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 3.8
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 3.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 3.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 3.8
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 3.8
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 3.8
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 3.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 3.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 3.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 3.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 3.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 3.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 3.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 5.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 8.9
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 8.9
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 8.9
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 8.9
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 8.9
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 8.9
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 8.9
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 8.9
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 8.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 8.9
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 25.8 bits (54), Expect = 0.24
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 12 CHVPSGYGMSSPPWCFLSAMTCPSSNEA 95
C+V G G+S W + ++MT P SN A
Sbjct: 536 CNVV-GSGLSHGNWIYPASMTIPGSNSA 562
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 25.0 bits (52), Expect = 0.41
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Frame = +2
Query: 305 PSFYNVVTGKTLALPNLIALQHIPLSPAG---VIAKRGP--RHRSPP-----FSPNKVWP 454
P +YN++ + + +P I + P P G I ++ P RH PP F P +
Sbjct: 333 PLYYNIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQIPRFRHIGPPTPFPRFIPPNAYR 392
Query: 455 PRPPL 469
RPPL
Sbjct: 393 FRPPL 397
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.0 bits (47), Expect = 1.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 187 PPDGEWLPSPMDFSNARG 134
PPD W P + F+NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 157 GPPTPFPRFIPPNAYRLRPPL 177
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 157 GPPTPFPRFIPPNAYRLRPPL 177
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 385 GPPTPFPRFIPPNAYRLRPPL 405
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 150 GPPTPFPRFIPPNAYRFRPPL 170
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 150 GPPTPFPRFIPPNAYRFRPPL 170
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 150 GPPTPFPRFIPPNAYRFRPPL 170
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 152 GPPTPFPRFIPPNAYRFRPPL 172
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 152 GPPTPFPRFIPPNAYRFRPPL 172
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 152 GPPTPFPRFIPPNAYRFRPPL 172
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 152 GPPTPFPRFIPPNAYRFRPPL 172
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 152 GPPTPFPRFIPPNAYRFRPPL 172
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 152 GPPTPFPRFIPPNAYRFRPPL 172
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 156 GPPTPFPRFIPPNAYRFRPPL 176
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 152 GPPTPFPRFIPPNAYRFRPPL 172
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 160 GPPTPFPRFIPPNAYRFRPPL 180
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 152 GPPTPFPRFIPPNAYRFRPPL 172
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 162 GPPTPFPRFIPPNAYRFRPPL 182
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 328 SHDVVKRRPVNCNTTHYRANWVPGP 254
S + K++P +C+T YR V P
Sbjct: 560 SDECNKKQPSDCDTLEYRNGEVTTP 584
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 371 GPPTPFPRFIPPNAYRFRPPL 391
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 377 GPPTPFPRFIPPNAYRFRPPL 397
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 397 GPPTPFPRFIPPNAYRFRPPL 417
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 367 GPPTPFPRFIPPNAYRFRPPL 387
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 378 GPPTPFPRFIPPNAYRFRPPL 398
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 378 GPPTPFPRFIPPNAYRFRPPL 398
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 367 GPPTPFPRFIPPNAYRFRPPL 387
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 399 GPPTPFPRFIPPNAYRFRPPL 419
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 5.1
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 211 LVGRRAYGPPDGEWLP 164
L+G R PP +W P
Sbjct: 408 LIGSRRTSPPPEDWKP 423
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 8.9
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +2
Query: 407 GPRHRSPPFSPNKVWPPRPPL 469
GP P F P + RPPL
Sbjct: 154 GPSTPFPQFIPPNAYKFRPPL 174
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 20.6 bits (41), Expect = 8.9
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P PL
Sbjct: 146 GPPTPFPRFIPPNAYRFHPPL 166
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 20.6 bits (41), Expect = 8.9
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P PL
Sbjct: 146 GPPTPFPRFIPPNAYRFHPPL 166
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 20.6 bits (41), Expect = 8.9
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P PL
Sbjct: 146 GPPTPFPRFIPPNAYRFHPPL 166
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 20.6 bits (41), Expect = 8.9
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P PL
Sbjct: 146 GPPTPFPRFIPPNAYRFHPPL 166
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 8.9
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P PL
Sbjct: 150 GPPTPFPRFIPPNAYRFHPPL 170
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 8.9
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P PL
Sbjct: 155 GPPTPFPRFIPPNAYRFHPPL 175
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 8.9
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P PL
Sbjct: 155 GPPTPFPRFIPPNAYRFHPPL 175
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 8.9
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P PL
Sbjct: 155 GPPTPFPRFIPPNAYRFHPPL 175
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 8.9
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +2
Query: 197 SSAYKGNKKKK*TVRGRSRGARYPIRP 277
++ Y + TVRG+ + YP P
Sbjct: 368 TNRYSSGRVLMRTVRGKEKTCYYPYHP 394
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 8.9
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +2
Query: 197 SSAYKGNKKKK*TVRGRSRGARYPIRP 277
++ Y + TVRG+ + YP P
Sbjct: 368 TNRYSSGRVLMRTVRGKEKTCYYPYHP 394
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.6 bits (41), Expect = 8.9
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 406 GPPAPIAPFFPKQGLAAKAPL 468
GPP P F P + PL
Sbjct: 371 GPPTPFPRFIPPNVYRFRPPL 391
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,246
Number of Sequences: 438
Number of extensions: 4360
Number of successful extensions: 43
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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