Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1063
         (440 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1790|AAN10726.1|  579|Drosophila melanogaster CG31720-P...    31   0.70 
AE014296-791|AAF47860.1|  180|Drosophila melanogaster CG1295-PA ...    29   3.7  
BT015296-1|AAT94525.1| 1923|Drosophila melanogaster AT26369p pro...    27   8.6  

>AE014134-1790|AAN10726.1|  579|Drosophila melanogaster CG31720-PA
           protein.
          Length = 579

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 353 LFVLCLFYTKV*VFYLSVEALRSLPGQLV 267
           L + C FY    + Y+S+  LR+LPG+++
Sbjct: 380 LLISCCFYALTLIVYISIAKLRNLPGKIL 408


>AE014296-791|AAF47860.1|  180|Drosophila melanogaster CG1295-PA
           protein.
          Length = 180

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 278 PADFVVPQPINKRPKLLYKINIKQTKGIRLTGAH 379
           P   ++  P+N R   L K  I   +G RLTG H
Sbjct: 9   PCGCLLDTPVNWRRSALNKTQINSHRGARLTGLH 42


>BT015296-1|AAT94525.1| 1923|Drosophila melanogaster AT26369p
           protein.
          Length = 1923

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +2

Query: 209 HDSYEDKFKTFVTNKKNIYLLADPADFVVPQPINKRPKLLYKINIKQTKGIRLTGAHQRK 388
           H+SY  KFK  VT+K  + + A   +   P  I  R K + +I  + +  +R+   H   
Sbjct: 292 HESYLSKFKNKVTDKLRLLIEAHITN--DPDVIKGRKKTVQEIFHEHSTHLRILREHTDS 349

Query: 389 NKIV 400
           + +V
Sbjct: 350 DALV 353


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,496,200
Number of Sequences: 53049
Number of extensions: 295380
Number of successful extensions: 622
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)