Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1063
         (440 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031627-15|CAA20966.1|  318|Caenorhabditis elegans Hypothetical...    31   0.37 
AF039053-10|AAC25884.2|  361|Caenorhabditis elegans Seven tm rec...    29   1.1  
AF125952-7|AAD14695.1|  352|Caenorhabditis elegans Seven tm rece...    29   1.5  
AC006722-13|AAK68415.2|  352|Caenorhabditis elegans Hypothetical...    29   1.5  
Z82078-3|CAB04942.1|  313|Caenorhabditis elegans Hypothetical pr...    27   4.6  
AF022978-9|AAG24185.1|  353|Caenorhabditis elegans Seven tm rece...    27   4.6  

>AL031627-15|CAA20966.1|  318|Caenorhabditis elegans Hypothetical
           protein Y102A5C.25 protein.
          Length = 318

 Score = 31.1 bits (67), Expect = 0.37
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = -3

Query: 288 KSAGSASKYIFFLLVTKVLNLSSYESWKIIT*KN*LYTPYFIPI 157
           KS+ +  KY++FL++ K ++   + +WK  T +N  +   F+ I
Sbjct: 141 KSSQNIIKYLYFLIIVKEVSCDMFSAWKYQTVQNVYWINLFLCI 184


>AF039053-10|AAC25884.2|  361|Caenorhabditis elegans Seven tm
           receptor protein 255 protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 321 LGLLFIG*GTTKSAGSASKYIF-FLLVTKVLNLSSYESWKII 199
           L LLF+G   T  A  A  +++ FL VT    L+S+ SWKII
Sbjct: 89  LNLLFVGFYGTTIAILALHFVYRFLSVTCNKLLNSFNSWKII 130


>AF125952-7|AAD14695.1|  352|Caenorhabditis elegans Seven tm
           receptor protein 258 protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -3

Query: 324 SLGLLFIG*GTTKSAGSASKYIF-FLLVTKVLNLSSYESWKII 199
           +L LLFIG      A  A  +I+ +L +TK   L +++SWKI+
Sbjct: 88  TLNLLFIGFFGMSVAILALHFIYRYLSITKSNLLKTFDSWKIV 130


>AC006722-13|AAK68415.2|  352|Caenorhabditis elegans Hypothetical
           protein Y19D10A.2 protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -3

Query: 324 SLGLLFIG*GTTKSAGSASKYIF-FLLVTKVLNLSSYESWKII 199
           +L LLFIG      A  A  +I+ +L +TK   L +++SWKI+
Sbjct: 88  TLNLLFIGFFGMSVAILALHFIYRYLSITKSNLLKTFDSWKIV 130


>Z82078-3|CAB04942.1|  313|Caenorhabditis elegans Hypothetical
           protein W09D6.2 protein.
          Length = 313

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 321 LGLLFIG*GTTKSAGSASKYIF-FLLVTKVLNLSSYESWKII 199
           L LLF+G      A  A  +++ FL +T   ++ S++SWKII
Sbjct: 89  LDLLFVGFFGISIAILALHFVYRFLSMTNNHHVKSFDSWKII 130


>AF022978-9|AAG24185.1|  353|Caenorhabditis elegans Seven tm
           receptor protein 256 protein.
          Length = 353

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -3

Query: 321 LGLLFIG*GTTKSAGSASKYIF-FLLVTKVLNLSSYESWKII 199
           L LLF+G      A  A  +I+ F  +T   +L S++SWKI+
Sbjct: 89  LDLLFVGCFGFSIAILALHFIYRFFSITNNPHLKSFDSWKIV 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,156,434
Number of Sequences: 27780
Number of extensions: 178173
Number of successful extensions: 360
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)