Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1060
         (467 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   3.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   3.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.3  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   5.7  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   7.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   9.9  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 14/64 (21%), Positives = 25/64 (39%)
 Frame = +1

Query: 73  VLGRVQTLFLHAGHVQDVYFRHHFFEIENAEIILDIDTPDDFITAQKRYTKIYKM*LNDC 252
           + G V    + AG    +Y RH ++        L +D  D+F+     +  I      D 
Sbjct: 45  IQGVVLVSIIAAGTAYSIYVRHTYYRRLYTITHLVLDYLDEFLIVALAFQVILNSCFCDP 104

Query: 253 VKYL 264
            K++
Sbjct: 105 AKWI 108


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 14/64 (21%), Positives = 25/64 (39%)
 Frame = +1

Query: 73  VLGRVQTLFLHAGHVQDVYFRHHFFEIENAEIILDIDTPDDFITAQKRYTKIYKM*LNDC 252
           + G V    + AG    +Y RH ++        L +D  D+F+     +  I      D 
Sbjct: 45  IQGVVLVSIIAAGTAYSIYVRHTYYRRLYTITHLVLDYLDEFLIVALAFQVILNSCFCDP 104

Query: 253 VKYL 264
            K++
Sbjct: 105 AKWI 108


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 285 DKECWRD*IFDAI 247
           D + WRD I+DAI
Sbjct: 307 DMDRWRDRIYDAI 319


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 145 RSDGGSRHPVHDPRAKRASGPVR 77
           R D   R+P + PR  R   P R
Sbjct: 223 REDQTRRNPYYRPRTSRTEPPRR 245


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 126 LLPPSLLRDRKCRNNF 173
           L PP+   DR C  NF
Sbjct: 341 LWPPAPQTDRLCNKNF 356


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +1

Query: 118 QDVYFRHHFFEIENAEIILDIDTP 189
           +DV     +  I    ++L++DTP
Sbjct: 307 EDVKALVEYARIRGIRVVLEVDTP 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,066
Number of Sequences: 336
Number of extensions: 2176
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)