Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1060
         (467 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M38561-1|AAA51907.1|  474|Homo sapiens CAD protein.                    38   0.017
D78586-1|BAA11423.1| 2225|Homo sapiens multifunctional protein C...    38   0.017
BC065510-1|AAH65510.1| 2225|Homo sapiens carbamoyl-phosphate syn...    38   0.017
BC014178-1|AAH14178.2|  851|Homo sapiens CAD protein protein.          38   0.017
AC013413-1|AAY24293.1| 2151|Homo sapiens unknown protein.              38   0.017
AB209390-1|BAD92627.1|  347|Homo sapiens fibroblast growth facto...    29   8.0  

>M38561-1|AAA51907.1|  474|Homo sapiens CAD protein.
          Length = 474

 Score = 37.9 bits (84), Expect = 0.017
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -3

Query: 150 LEEVMAEVDILYMTRVQKERL-DPSEYANVKAQFVL 46
           +EE + + D+LYMTR+QKER     EY     QF+L
Sbjct: 381 IEEALPDTDVLYMTRIQKERFGSTQEYEACFGQFIL 416


>D78586-1|BAA11423.1| 2225|Homo sapiens multifunctional protein CAD
            protein.
          Length = 2225

 Score = 37.9 bits (84), Expect = 0.017
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -3

Query: 150  LEEVMAEVDILYMTRVQKERL-DPSEYANVKAQFVL 46
            +EE + + D+LYMTR+QKER     EY     QF+L
Sbjct: 2132 IEEALPDTDVLYMTRIQKERFGSTQEYEACFGQFIL 2167


>BC065510-1|AAH65510.1| 2225|Homo sapiens carbamoyl-phosphate
            synthetase 2, aspartate transcarbamylase, and
            dihydroorotas protein.
          Length = 2225

 Score = 37.9 bits (84), Expect = 0.017
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -3

Query: 150  LEEVMAEVDILYMTRVQKERL-DPSEYANVKAQFVL 46
            +EE + + D+LYMTR+QKER     EY     QF+L
Sbjct: 2132 IEEALPDTDVLYMTRIQKERFGSTQEYEACFGQFIL 2167


>BC014178-1|AAH14178.2|  851|Homo sapiens CAD protein protein.
          Length = 851

 Score = 37.9 bits (84), Expect = 0.017
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -3

Query: 150 LEEVMAEVDILYMTRVQKERL-DPSEYANVKAQFVL 46
           +EE + + D+LYMTR+QKER     EY     QF+L
Sbjct: 758 IEEALPDTDVLYMTRIQKERFGSTQEYEACFGQFIL 793


>AC013413-1|AAY24293.1| 2151|Homo sapiens unknown protein.
          Length = 2151

 Score = 37.9 bits (84), Expect = 0.017
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -3

Query: 150  LEEVMAEVDILYMTRVQKERL-DPSEYANVKAQFVL 46
            +EE + + D+LYMTR+QKER     EY     QF+L
Sbjct: 2058 IEEALPDTDVLYMTRIQKERFGSTQEYEACFGQFIL 2093


>AB209390-1|BAD92627.1|  347|Homo sapiens fibroblast growth factor
           11 variant protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 145 RSDGGSRHPVHDPRAKRASGPV 80
           R   G+ HP H+PRA   SGPV
Sbjct: 281 RFKNGAGHPSHNPRATPKSGPV 302


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,294,717
Number of Sequences: 237096
Number of extensions: 1259784
Number of successful extensions: 2383
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2383
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)