Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1060
(467 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025065-1|ABE73236.1| 746|Drosophila melanogaster IP15551p pro... 34 0.11
AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-P... 34 0.11
X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like p... 32 0.44
S74010-1|AAB32204.1| 81|Drosophila melanogaster aspartate tran... 31 0.78
BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p pro... 29 3.1
AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p pro... 29 3.1
AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-P... 29 3.1
AY122257-1|AAM52769.1| 1608|Drosophila melanogaster SD08305p pro... 28 5.5
AY071155-1|AAL48777.1| 100|Drosophila melanogaster RE18615p pro... 27 9.6
AJ249754-1|CAB56698.1| 100|Drosophila melanogaster sec61beta pr... 27 9.6
AE013599-1924|AAF58229.1| 100|Drosophila melanogaster CG10130-P... 27 9.6
>BT025065-1|ABE73236.1| 746|Drosophila melanogaster IP15551p
protein.
Length = 746
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -3
Query: 150 LEEVMAEVDILYMTRVQKERLDPSE 76
L+ V+ + D+LYMTR+Q+ER D E
Sbjct: 649 LKNVLPDTDVLYMTRIQRERFDNVE 673
>AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-PA,
isoform A protein.
Length = 2224
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -3
Query: 150 LEEVMAEVDILYMTRVQKERLDPSE 76
L+ V+ + D+LYMTR+Q+ER D E
Sbjct: 2127 LKNVLPDTDVLYMTRIQRERFDNVE 2151
>X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like
protein protein.
Length = 110
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 3 LELVDPPGCRDRWREEQTA 59
LELVDPPGCR+ R+ Q A
Sbjct: 10 LELVDPPGCRNSARDRQRA 28
>S74010-1|AAB32204.1| 81|Drosophila melanogaster aspartate
transcarbamylase domain protein.
Length = 81
Score = 31.1 bits (67), Expect = 0.78
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = -3
Query: 150 LEEVMAEVDILYMTRVQKER 91
L+ V+ + D+LYMTR+Q+ER
Sbjct: 62 LKNVLPDTDVLYMTRIQRER 81
>BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p protein.
Length = 1455
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 36 RWREEQTALSRWRTRTGPDALFARGSCTGCLLPPSLLRDRKCRNNFRY 179
+W E S +TR ++L S T C P L + RKC FR+
Sbjct: 917 KWEEAVLVCSNCQTRFVNESLLDHHSRTLCHNPQKLFQCRKCPLRFRW 964
>AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p protein.
Length = 1454
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 36 RWREEQTALSRWRTRTGPDALFARGSCTGCLLPPSLLRDRKCRNNFRY 179
+W E S +TR ++L S T C P L + RKC FR+
Sbjct: 916 KWEEAVLVCSNCQTRFVNESLLDHHSRTLCHNPQKLFQCRKCPLRFRW 963
>AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-PA
protein.
Length = 1266
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 36 RWREEQTALSRWRTRTGPDALFARGSCTGCLLPPSLLRDRKCRNNFRY 179
+W E S +TR ++L S T C P L + RKC FR+
Sbjct: 728 KWEEAVLVCSNCQTRFVNESLLDHHSRTLCHNPQKLFQCRKCPLRFRW 775
>AY122257-1|AAM52769.1| 1608|Drosophila melanogaster SD08305p protein.
Length = 1608
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 154 LSRRSDGGSRHPVHDPRAKR 95
+SRR+DG PVH+P A+R
Sbjct: 1426 VSRRNDGRQPEPVHEPGAQR 1445
>AY071155-1|AAL48777.1| 100|Drosophila melanogaster RE18615p
protein.
Length = 100
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 133 GSRHP--VHDPRAKRASGPVRVRQRESAVCSSRQRSLQPGGS 14
GSR P + PR+ + G ++QR++ ++ RS PGG+
Sbjct: 13 GSRSPSKLSAPRSAGSGGGSTLKQRKTTTSTTAARSRAPGGA 54
>AJ249754-1|CAB56698.1| 100|Drosophila melanogaster sec61beta
protein protein.
Length = 100
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 133 GSRHP--VHDPRAKRASGPVRVRQRESAVCSSRQRSLQPGGS 14
GSR P + PR+ + G ++QR++ ++ RS PGG+
Sbjct: 13 GSRSPSKLSAPRSAGSGGGSTLKQRKTTTSTTAARSRAPGGA 54
>AE013599-1924|AAF58229.1| 100|Drosophila melanogaster CG10130-PA
protein.
Length = 100
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 133 GSRHP--VHDPRAKRASGPVRVRQRESAVCSSRQRSLQPGGS 14
GSR P + PR+ + G ++QR++ ++ RS PGG+
Sbjct: 13 GSRSPSKLSAPRSAGSGGGSTLKQRKTTTSTTAARSRAPGGA 54
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,968,747
Number of Sequences: 53049
Number of extensions: 386132
Number of successful extensions: 846
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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