Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1059
         (413 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   3.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   3.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   3.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   8.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   8.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    20   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 151 LLYPCRRTVFTGISPFVVCHYHF 83
           LL+ C   +FT    F++C Y+F
Sbjct: 266 LLFCCAFIIFTMHLLFLLCIYYF 288



 Score = 21.0 bits (42), Expect = 4.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 139 CRRTVFTGISPFVVCHYHF 83
           C   +FT    F++C YHF
Sbjct: 151 CAFIIFTVHLLFLLCIYHF 169


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 139 CRRTVFTGISPFVVCHYHFT 80
           C R    G  P + C+YHFT
Sbjct: 108 CARACREGEPPRI-CYYHFT 126


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 139 CRRTVFTGISPFVVCHYHFT 80
           C R    G  P + C+YHFT
Sbjct: 108 CARACREGEPPRI-CYYHFT 126


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +1

Query: 172 STKSRRYCDF-SRQKWSFPAAIEMAGLCHHPRSIVNPGYCWRVDENGYD 315
           ++K +R  D+ S    + P      G   HP ++++ GY   +    YD
Sbjct: 97  ASKRQRTDDWLSSPSGNVPPLTPSPGPPSHPYTVISNGYSSPMSSGSYD 145


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -3

Query: 129 PFSQVYPHSLSAIITLLMSLTTTRVSVSFEVNVRRVSTECT 7
           P   +  HS  A  T ++SL   +  V  + ++RR   + T
Sbjct: 122 PARTLLEHSFVAFNTNIISLVQNKDYVERDTDIRRFLIKVT 162


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 360 YNNGIATGERSMG 398
           YNN I TG+ ++G
Sbjct: 506 YNNKIPTGDGALG 518


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 266 PSSILATVGVSTKTAMIH 319
           PSS +A V +S K A++H
Sbjct: 86  PSSDMADVLLSLKHAVVH 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,258
Number of Sequences: 336
Number of extensions: 2176
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)