Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1059
(413 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 4e-11
SB_1027| Best HMM Match : Carb_anhydrase (HMM E-Value=0) 56 2e-08
SB_28654| Best HMM Match : Carb_anhydrase (HMM E-Value=7.3e-09) 56 2e-08
SB_16664| Best HMM Match : Carb_anhydrase (HMM E-Value=1.7e-05) 50 1e-06
SB_3617| Best HMM Match : Carb_anhydrase (HMM E-Value=3.4e-15) 36 0.010
SB_59634| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.023
SB_22846| Best HMM Match : AbfB (HMM E-Value=4.5) 31 0.38
SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.66
SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_10871| Best HMM Match : SWIM (HMM E-Value=0.11) 28 2.6
SB_20107| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_36782| Best HMM Match : Pkinase (HMM E-Value=1.4e-32) 28 3.5
SB_34124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_38463| Best HMM Match : Exo_endo_phos (HMM E-Value=4.1e-17) 28 3.5
SB_24749| Best HMM Match : Adap_comp_sub (HMM E-Value=2.24208e-44) 27 4.6
SB_19063| Best HMM Match : rve (HMM E-Value=3.6e-14) 27 4.6
SB_53674| Best HMM Match : rve (HMM E-Value=0.00095) 27 4.6
SB_52818| Best HMM Match : CUB (HMM E-Value=1.6e-23) 27 4.6
SB_14427| Best HMM Match : Cadherin (HMM E-Value=0) 27 4.6
SB_22331| Best HMM Match : fn3 (HMM E-Value=7.1e-14) 27 6.1
SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6) 27 8.1
SB_6982| Best HMM Match : Plasmodium_HRP (HMM E-Value=5.5) 27 8.1
>SB_43059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 64.1 bits (149), Expect = 4e-11
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Frame = +2
Query: 62 VVVSDISKVIMADNEWGYTCENGPATWIEKFPQARGTRQSPVDIVTSRVKSGASLPPLKW 241
VV+S + + AD W Y + GP+ W F Q G+ QSP+DI+TS V SL L++
Sbjct: 417 VVLSLLGASLAAD--WDYDSK-GPSKWSSSFSQCNGSSQSPIDIITSSVAFDQSLGELQF 473
Query: 242 RDSVIILVPSSI-LATVG----VSTKTAMIHELKGGPLNNDVYKLQQWHCHWGALNGEGS 406
+ I S I L G V+ +A + GG L Y Q+H HWG+ N +GS
Sbjct: 474 VNFDTIPTGSKISLKNNGHAFQVNMLSAGTFTVSGGGL-GATYSTVQFHLHWGSKNEQGS 532
Query: 407 EH 412
EH
Sbjct: 533 EH 534
>SB_1027| Best HMM Match : Carb_anhydrase (HMM E-Value=0)
Length = 291
Score = 55.6 bits (128), Expect = 2e-08
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Frame = +2
Query: 65 VVSDISKVIMAD--NEWGYTCENGPATWIEKFPQARGTRQSPVDIVTSRVKSGASLPPL- 235
++ + +V AD +W Y GP+TW FP G +QSP++I T K SL L
Sbjct: 17 ILGALERVEAADPMGDWSYDEATGPSTWPNHFPHCGGKKQSPININTEEAKYDGSLTDLD 76
Query: 236 -KWRDSVIILVPSSILATVGVSTKTAMIHELKGGPLNNDVYKLQQWHCHWGALNGEGSEH 412
++ ++ +L+ + + ++ G L++ Y+L Q+H H G+ + +GSEH
Sbjct: 77 IRYPNTTDVLLVNHHGHAIEADILSSEPFVATGADLSSR-YRLAQFHFHVGSSDIQGSEH 135
>SB_28654| Best HMM Match : Carb_anhydrase (HMM E-Value=7.3e-09)
Length = 252
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Frame = +2
Query: 62 VVVSDISKVIMADNEWGYTCEN--GPATWIEKFPQARGTRQSPVDIVTSRVKSGASLPPL 235
+V ++ V AD EW Y GP W ++P G+ QSP++IVTS V +SL L
Sbjct: 89 IVFLGLAYVCFADGEWNYNFSGPIGPDHWANRYPACNGSSQSPINIVTSSVMYDSSLGKL 148
Query: 236 KWRDSVIILVPSSILA-----TVGVSTKTAMIHELKGGPLNNDVYKLQQWHCHWGALNGE 400
++ + I + I+ V+ T + + GG L + + Q+H H G +
Sbjct: 149 QFNNFDRIPSGAKIMVRNNGHAFQVNFMTPNLFYVHGGGLGAN-FTTAQFHMHLGEDDTR 207
Query: 401 GSEH 412
G+EH
Sbjct: 208 GAEH 211
>SB_16664| Best HMM Match : Carb_anhydrase (HMM E-Value=1.7e-05)
Length = 134
Score = 49.6 bits (113), Expect = 1e-06
Identities = 39/108 (36%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +2
Query: 104 EWGYTC-ENGPATWIEKFPQARGTRQSPVDIVTSRVKSGASLPPLKWRDSVIILVPSSIL 280
+W Y ENGP W + + A QSP+DIVT V +SL L W + V +S L
Sbjct: 8 KWSYIDGENGPLRWHKCYIGAEPGHQSPIDIVTKDVTQDSSLGSL-W--NTYEPVANSTL 64
Query: 281 ATVGVSTKTAMIHE---LKGGPLNNDVYKLQQWHCHWGAL-NGEGSEH 412
G + + + L GGPL D Y+L HW A GSEH
Sbjct: 65 TNDGRTLQLTFANNNNVLSGGPL-TDEYQLAMIKFHWAATEESAGSEH 111
>SB_3617| Best HMM Match : Carb_anhydrase (HMM E-Value=3.4e-15)
Length = 338
Score = 36.3 bits (80), Expect = 0.010
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 128 GPATWIEKFPQARGTRQSPVDIVTSRV 208
GP W +P+ +G QSP++IVTS+V
Sbjct: 20 GPDDWASAYPECKGLAQSPINIVTSKV 46
>SB_59634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 361
Score = 35.1 bits (77), Expect = 0.023
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 323 LKGGPLNNDVYKLQQWHCHWGALNGEGSEH 412
+ GPL++ YK Q+H HWG EGSEH
Sbjct: 2 ITSGPLSHK-YKFAQFHFHWGKDEKEGSEH 30
>SB_22846| Best HMM Match : AbfB (HMM E-Value=4.5)
Length = 349
Score = 31.1 bits (67), Expect = 0.38
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = -3
Query: 240 HFNGGREAPLLTREVTISTGLCRVPRA*GNFSIHVAGPFSQVYPHSLSAIITLLMSLTTT 61
H N E LL TI T L G F +H +PH+ + I T L+ TT
Sbjct: 25 HANTTIETFLLHANTTIGTFLLHANMTIGTFLLHANTTIGTFFPHANTTIGTFLLHANTT 84
>SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 30.3 bits (65), Expect = 0.66
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 139 MDREVSSSTWHSTKSRRYCDFSRQKWSFPAAIEMAGLCHHPRSI 270
+D E ++ H K ++ DF + + A ++M+ L H PR I
Sbjct: 753 IDEEAFRASRHDLKGKQIMDFGKNSLTVFAKMQMSTLAHPPRGI 796
>SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2214
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 140 WIEKFPQARGTRQSPVDIVTSRVKSGASLPPLKWRDSVIILVPSSI 277
W++ FP+ G + VDI T+R + L + W S +I+ +SI
Sbjct: 1881 WVDIFPKNEGVLKPSVDI-TAREPTNYELRVIVWNTSGVIMDETSI 1925
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 29.1 bits (62), Expect = 1.5
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -2
Query: 370 PLL*FVNIIVERSTF*FMNHSRFRRHANSSQD*RWNEDDDRVPPFQWRQGSSTFDARS 197
PL N+ ER++ NHS + S+ RW + PPF++ +G +D R+
Sbjct: 160 PLRIEYNLYPERTS----NHSPGDYYHRSASPVRWKQRASNPPPFEFDRGRGDYDRRN 213
>SB_10871| Best HMM Match : SWIM (HMM E-Value=0.11)
Length = 167
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 232 WRQGSSTFDARSHNIDGTLSSATC-LRKLLYPCRRTVFTGISPFVVC 95
++ GSS+ ++SH +D T+ TC + K PC+ +S C
Sbjct: 111 FKVGSSSDGSQSHTVDMTIGMCTCGIGKDGSPCKHQYVLWVSKLADC 157
>SB_20107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 232 WRQGSSTFDARSHNIDGTLSSATC-LRKLLYPCRRTVFTGISPFVVC 95
++ GSS+ ++SH +D T+ TC + K PC+ +S C
Sbjct: 125 FKVGSSSDGSQSHTVDMTIGMCTCGIGKDGSPCKHQYVLWVSKLADC 171
>SB_36782| Best HMM Match : Pkinase (HMM E-Value=1.4e-32)
Length = 310
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 266 PSSILATVGVSTKTAM-IHELKGGPLNNDVYKLQ 364
P SI+ VG K ++ IH++ G N DVYK++
Sbjct: 231 PESIIYKVGKGHKQSLNIHDIPGEVKNYDVYKVR 264
>SB_34124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 199 FSRQKWSFPAAIEMAGLCHHPRSIVNPGYCWRVDENGYDS*IKRWTSQ 342
FSR FP E+ LC + I+ PGY W+ N R+TS+
Sbjct: 321 FSRFGPCFPCPAEL--LCRNESFILAPGYYWQWRSNASFQNFIRFTSE 366
>SB_38463| Best HMM Match : Exo_endo_phos (HMM E-Value=4.1e-17)
Length = 828
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 14 SVDTRLTFTSKDTDTRVVVSDISKVIMADNEWGYTCENG 130
S+DT L + + ++VS ++ + A W Y C NG
Sbjct: 549 SLDTELYPSFRPVSNLMLVSKATEKVAASQLWEYLCSNG 587
>SB_24749| Best HMM Match : Adap_comp_sub (HMM E-Value=2.24208e-44)
Length = 331
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 251 QSPAISMAAGKLHF*REKSQYRRDFVECHVLEETSLSMSP 132
Q+ S G++ + R+ +YRR+ + VLE +L MSP
Sbjct: 146 QAQITSQVTGQIGWRRDGIKYRRNELFLDVLESVNLLMSP 185
>SB_19063| Best HMM Match : rve (HMM E-Value=3.6e-14)
Length = 467
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 136 DMDREVSSSTWHSTKSRRYCDFSRQKWSF--PAAIEMAG 246
D + + + W + R+C R KWSF PAA M G
Sbjct: 270 DKELKQALEEWDLERINRFCIQRRIKWSFIPPAASHMGG 308
>SB_53674| Best HMM Match : rve (HMM E-Value=0.00095)
Length = 263
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 136 DMDREVSSSTWHSTKSRRYCDFSRQKWSF--PAAIEMAG 246
D + + + W + R+C R KWSF PAA M G
Sbjct: 46 DKELKQALGEWDLERINRFCIQRRIKWSFIPPAASHMGG 84
>SB_52818| Best HMM Match : CUB (HMM E-Value=1.6e-23)
Length = 898
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 265 SIVNPGYCWRVDENGYDS*IKRWTSQQ*CLQITTMALPLG 384
S VN +C +V G D + W Q CL +T P G
Sbjct: 63 SSVNRSFCMKVSILGDDKRPQHWPQGQYCLYQSTSKCPFG 102
>SB_14427| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2325
Score = 27.5 bits (58), Expect = 4.6
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +2
Query: 41 SKDTDTRVVVSDISKVIMADNEWGYTCENGPATWIEKFPQARGTRQSPVDIVTSRVKSGA 220
S T+ R+ ++ + + N Y NGP ++ +K T DI+ + +G
Sbjct: 2092 SYQTEFRINAVCLNSSLSSGNA-AYLTVNGPLSY-DKMESLNYT----YDIMVEAMDNG- 2144
Query: 221 SLPPLKWRDSVIILV 265
+PPL W DSV + V
Sbjct: 2145 -IPPLAWNDSVFVRV 2158
>SB_22331| Best HMM Match : fn3 (HMM E-Value=7.1e-14)
Length = 908
Score = 27.1 bits (57), Expect = 6.1
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = -2
Query: 355 VNIIVERSTF*FMNHSRFRRHANSSQD*RWNEDDDRVPPFQWRQGSSTFDARSHNIDGTL 176
V + + S+F F+ ANS Q N D D V W + AR + T
Sbjct: 136 VEVYTDNSSFIFVIIQCNGLLANSQQF-DGNSDRDNVK-VNWF--TRPVGARYIRVLSTA 191
Query: 175 SS-ATCLRKLLYPCRRTVFTGISP 107
S+ ATC+R LY C R V ++P
Sbjct: 192 SNGATCMRMELYGCNRYVAVKVAP 215
>SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 26.6 bits (56), Expect = 8.1
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 89 IMADNEWGYTCENGPATWIEKFPQARGTRQSPVDIVTSRVKSGASLPPLKWRDSVIILVP 268
I + EWGY C P WI + D + + ++ S R S II++
Sbjct: 459 IKVNGEWGYVC---PKFWIHMNSRVACGMLGFKDYIKTPMRV-LSASHYHHRQSFIIMIT 514
Query: 269 SSILAT 286
SS++ T
Sbjct: 515 SSVMTT 520
>SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6)
Length = 493
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 313 HSRFR-RHANSSQD*RWNEDDDRVPPFQW-RQGSSTFDARSHNIDGTLSSATCLRK 152
HSR++ + ++++ R DD + R+G +T +R D T+ + C RK
Sbjct: 303 HSRYKHKDDDTTKQSRGKRKDDTTKQSRGKRRGDTTIQSRGKRRDDTIKQSRCKRK 358
>SB_6982| Best HMM Match : Plasmodium_HRP (HMM E-Value=5.5)
Length = 389
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 271 RWNEDDDRVPPFQWRQGSSTFDARSHNIDGTLSS 170
+W RVP W Q S TF A S + +L +
Sbjct: 246 QWRFHPKRVPMHWWSQPSPTFGASSQTVQFSLDT 279
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,303,153
Number of Sequences: 59808
Number of extensions: 311699
Number of successful extensions: 820
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 764823134
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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