SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1058
         (413 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56628| Best HMM Match : Actin (HMM E-Value=0)                      196   6e-51
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)             192   1e-49
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)              192   1e-49
SB_56| Best HMM Match : Actin (HMM E-Value=0)                         190   4e-49
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)              189   9e-49
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)             136   5e-33
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)              82   2e-16
SB_54| Best HMM Match : Actin (HMM E-Value=0)                          59   1e-09
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)                  58   4e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)                 48   4e-06
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)               46   1e-05
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)                  42   2e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.030
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)                  34   0.053
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.28 
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)                    31   0.28 
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   0.66 
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.1  
SB_17698| Best HMM Match : Neuromodulin (HMM E-Value=2.8)              29   1.1  
SB_47874| Best HMM Match : Keratin_B2 (HMM E-Value=4.9)                29   2.0  
SB_23441| Best HMM Match : IncA (HMM E-Value=2.5)                      29   2.0  
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.6  
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.6  
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.6  
SB_18995| Best HMM Match : rve (HMM E-Value=0.0012)                    27   4.6  
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.1  
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)                  27   6.1  
SB_7282| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.1  
SB_14707| Best HMM Match : A_deamin (HMM E-Value=0)                    27   8.1  
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.1  

>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
          Length = 376

 Score =  196 bits (478), Expect = 6e-51
 Identities = 91/111 (81%), Positives = 93/111 (83%)
 Frame = +3

Query: 78  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHXXXXXXXXXXXXXCRR*GQ 257
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH                  Q
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 258 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 410
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111


>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score =  192 bits (467), Expect = 1e-49
 Identities = 90/111 (81%), Positives = 92/111 (82%)
 Frame = +3

Query: 78  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHXXXXXXXXXXXXXCRR*GQ 257
           M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH                  Q
Sbjct: 1   MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 258 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 410
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111


>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score =  192 bits (467), Expect = 1e-49
 Identities = 88/111 (79%), Positives = 92/111 (82%)
 Frame = +3

Query: 78  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHXXXXXXXXXXXXXCRR*GQ 257
           M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH                  Q
Sbjct: 1   MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 258 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 410
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111


>SB_56| Best HMM Match : Actin (HMM E-Value=0)
          Length = 375

 Score =  190 bits (463), Expect = 4e-49
 Identities = 89/109 (81%), Positives = 91/109 (83%)
 Frame = +3

Query: 84  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHXXXXXXXXXXXXXCRR*GQSK 263
           ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH                  QSK
Sbjct: 2   EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 264 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 410
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 110


>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score =  189 bits (460), Expect = 9e-49
 Identities = 88/109 (80%), Positives = 91/109 (83%)
 Frame = +3

Query: 84  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHXXXXXXXXXXXXXCRR*GQSK 263
           +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH                  QSK
Sbjct: 2   EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 264 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 410
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 110


>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score =  136 bits (330), Expect = 5e-33
 Identities = 65/89 (73%), Positives = 68/89 (76%)
 Frame = +3

Query: 84  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHXXXXXXXXXXXXXCRR*GQSK 263
           D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH                  QSK
Sbjct: 2   DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 264 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 350
           RGILTLKYPIEHGIVTNWDDMEKI   TF
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIMFETF 90


>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score = 81.8 bits (193), Expect = 2e-16
 Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
 Frame = +3

Query: 96  AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHXXXXXXXXXXXXXCRR*GQSKRG 269
           + +V DNG+G  K G+AG + P  +FPS+VGRP  R                      R 
Sbjct: 7   SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66

Query: 270 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPL 410
           +L + YP+++GIV NWDDM+ +W +TF  +++ + P    VLLTE PL
Sbjct: 67  MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPL 114


>SB_54| Best HMM Match : Actin (HMM E-Value=0)
          Length = 2486

 Score = 59.3 bits (137), Expect = 1e-09
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = +3

Query: 102  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 200
            +V+DNGSG CKAG + D++PR VFP+IVGRPRH
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRH 2129



 Score = 37.5 bits (83), Expect = 0.004
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = +3

Query: 330  KIWHHTFYNELRVAPEEHPVLLTEAPL 410
            K+W H F ++LRV  E+ PVLLTEAPL
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPL 2155


>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
          Length = 1392

 Score = 57.6 bits (133), Expect = 4e-09
 Identities = 26/38 (68%), Positives = 28/38 (73%)
 Frame = +3

Query: 87   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 200
            E    LV+D GS M K GFAGDDAP+ VFP IVGRPRH
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRH 1391


>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
          Length = 921

 Score = 47.6 bits (108), Expect = 4e-06
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +3

Query: 72  FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 197
           FK+      A+V+DNG G+ K GFAGD  PR + P++VG P+
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQ 734


>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
          Length = 372

 Score = 46.0 bits (104), Expect = 1e-05
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = +3

Query: 282 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 395
           K+PI H IV +WD ME+ W    +  LR  PE+H  LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336


>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
          Length = 580

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 25/90 (27%), Positives = 42/90 (46%)
 Frame = +3

Query: 90  EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHXXXXXXXXXXXXXCRR*GQSKRG 269
           ++A LV+D G+   K GFA + APR++ P+ + + +              C+        
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSERRKLFIGDQIEECK-----DYS 285

Query: 270 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNE 359
            L    P + G + NWD  ++IW +TF  E
Sbjct: 286 ALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315


>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 198

 Score = 34.7 bits (76), Expect = 0.030
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -1

Query: 200 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 84
           MA  + D G++ + SI+S E GLAHTGAI+  Q  +  V
Sbjct: 1   MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39


>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
          Length = 240

 Score = 33.9 bits (74), Expect = 0.053
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 288 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 404
           PI+ G++ +WD  EKI  + +   ++     HP+L++EA
Sbjct: 3   PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEA 41


>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 120

 Score = 31.5 bits (68), Expect = 0.28
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 175 GNTARGASSPAKPALHIPEPLSTT 104
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
          Length = 170

 Score = 31.5 bits (68), Expect = 0.28
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 175 GNTARGASSPAKPALHIPEPLSTT 104
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 749

 Score = 30.3 bits (65), Expect = 0.66
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 175 GNTARGASSPAKPALHIPEPLSTT 104
           GNT R    PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563


>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 334

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -2

Query: 310 VTIPCSMGYLRVRIPLLLWPHLLHKSPYCP 221
           V  PC M  L VR+    W  +LH    CP
Sbjct: 73  VVCPCCMSVLHVRVACPCWVSVLHVRVVCP 102



 Score = 26.6 bits (56), Expect = 8.1
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -2

Query: 310 VTIPCSMGYLRVRIPLLLWPHLLHKSPYCP 221
           V  PC M  LRVR+    W  +L     CP
Sbjct: 34  VACPCCMSLLRVRVVCPCWVSVLGVRVACP 63


>SB_17698| Best HMM Match : Neuromodulin (HMM E-Value=2.8)
          Length = 436

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = -1

Query: 278 GQDTSFALASSPT*ESLLSHTDHHALMAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQR 99
           GQ+  F+LASS    S+ +  D + +M G S D  +    S +  +   A+T  +   Q+
Sbjct: 107 GQERPFSLASSQKVASIKAKVDLNVVMQGKSIDGDRMSKASSVQSKPAQANTVPLCSLQK 166

Query: 98  GNFF 87
             ++
Sbjct: 167 NGYW 170


>SB_47874| Best HMM Match : Keratin_B2 (HMM E-Value=4.9)
          Length = 253

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -1

Query: 269 TSFALASSPT*ESLLSHTDHHALMAGPSHDRGKHCARSIIS 147
           T   +  SPT   + SHTDHH L +   H+   H    ++S
Sbjct: 173 TLTTILQSPTDHHVQSHTDHHVL-SNTDHNVQSHTDHHVLS 212


>SB_23441| Best HMM Match : IncA (HMM E-Value=2.5)
          Length = 927

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -2

Query: 292 MGYLRVRIPLLLWPHLLHKSPYCPIPTITP*WRGLPTIEGNTARGASSPAKPALHI 125
           MGY+ ++ P  +W  L       P PT+TP     PT+  +T     + A P L +
Sbjct: 363 MGYVVIKAPYPVWTLLSSTPTITPTPTVTP--TPTPTVSLSTHILVVAVAVPILFL 416


>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 175 GNTARGASSPAKPALHIPEPLSTT 104
           GNT R     AKPAL++P P S T
Sbjct: 40  GNTNRRTRIQAKPALNLPSPPSKT 63


>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 635

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 175 GNTARGASSPAKPALHIPEPLSTT 104
           GNT R    PAKP L IP P + T
Sbjct: 68  GNTNRRTRIPAKPTLTIPSPPTKT 91


>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 285

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -2

Query: 190 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 80
           L  IE +    A++P  P + +P+ +   +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258


>SB_18995| Best HMM Match : rve (HMM E-Value=0.0012)
          Length = 1225

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 195 GAFPRSRETLREEHHLLRSRPCTYRS 118
           G +P S++T R E   + +RPCT  S
Sbjct: 832 GCYPWSKQTFRHEGPPISARPCTAMS 857


>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 220

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 279 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTE 401
           L+ P +  +VT+++  E++  H F +     P    HPV++TE
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTE 173


>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
          Length = 766

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 96  AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 200
           + +++D GS   KAGFA ++A +  + S++G   H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516


>SB_7282| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1702

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 328  SMSSQLVTIPCSMGYLRVRIPLLLW-PHLLHKSPYCPIPTIT 206
            S  S L+ +   +   R  I    W P L+  S YCPIP I+
Sbjct: 1005 SEMSVLIKVVAQLAECRCAIDSHRWVPGLIPGSDYCPIPAIS 1046


>SB_14707| Best HMM Match : A_deamin (HMM E-Value=0)
          Length = 1243

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = -1

Query: 287  VFEGQDTSFALASSPT*ESLLSHTDHHALMAGPSHDRGKHCARSIISC---EAGLAHTGA 117
            VF  Q +  +L+   T   L++   HHA +   +    K   R +++C   +A L  +G 
Sbjct: 845  VFLSQPSPGSLSGVRTHFDLIAALAHHAFLQIAASIPDKFAGRKVVACIIMKASLEDSGR 904

Query: 116  IVYYQRGN 93
            +V    GN
Sbjct: 905  VVSLGAGN 912


>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1077

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 75  KMCDEEVAALVVDNG-SGMCKAGFAGD 152
           ++CD++    + +N    MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,279,042
Number of Sequences: 59808
Number of extensions: 324012
Number of successful extensions: 863
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 764823134
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -