Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1058
         (413 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         198   5e-53
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         198   5e-53
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         198   5e-53
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          192   3e-51
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    23   3.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   3.3  
AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450 CY...    23   4.4  
AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450 CY...    23   4.4  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   5.8  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    22   7.7  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  198 bits (484), Expect = 5e-53
 Identities = 93/111 (83%), Positives = 93/111 (83%)
 Frame = +3

Query: 78  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHXXXXXXXXXXXXXCRR*GQ 257
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH                  Q
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 258 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 410
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  198 bits (484), Expect = 5e-53
 Identities = 93/111 (83%), Positives = 93/111 (83%)
 Frame = +3

Query: 78  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHXXXXXXXXXXXXXCRR*GQ 257
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH                  Q
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 258 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 410
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  198 bits (484), Expect = 5e-53
 Identities = 93/111 (83%), Positives = 93/111 (83%)
 Frame = +3

Query: 78  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHXXXXXXXXXXXXXCRR*GQ 257
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH                  Q
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 258 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 410
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  192 bits (469), Expect = 3e-51
 Identities = 88/111 (79%), Positives = 91/111 (81%)
 Frame = +3

Query: 78  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHXXXXXXXXXXXXXCRR*GQ 257
           MCD++  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH                  Q
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60

Query: 258 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 410
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL
Sbjct: 61  SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 72  FKMCDEEVAALVVDNGSGMC 131
           +++C E+ A   +DNG+ MC
Sbjct: 42  YRVCHEQHATPQMDNGTVMC 61


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -3

Query: 183 RSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 82
           + R TL E       +P  +R H LLP   +  R
Sbjct: 841 KRRPTLTESTSFELKKPKDFRKHSLLPLNNVFDR 874



 Score = 23.0 bits (47), Expect = 4.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 399  Q*AGRGVPRGRHA 361
            Q AG G PRGRH+
Sbjct: 1374 QPAGGGTPRGRHS 1386


>AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450
           CYP4C28 protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 260 QKRYPDPQIPHRTRNRH 310
           +K YPD  +P  + NRH
Sbjct: 117 EKFYPDRFLPENSTNRH 133


>AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450
           CYP4G17 protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 272 PDPQIPHRTRNRH 310
           PD  +P RT+NRH
Sbjct: 122 PDNFLPERTQNRH 134


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 363 AAHCRRYDAKSSPCHPS 313
           +AH RR+D  SSP  P+
Sbjct: 170 SAHDRRFDDASSPAVPA 186


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 185 GKAPPSGRDGRYGTV 229
           G+  P GRDG +G V
Sbjct: 344 GQPGPRGRDGNFGPV 358


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,579
Number of Sequences: 2352
Number of extensions: 10449
Number of successful extensions: 35
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)