Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1053
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   0.92 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.8  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   4.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 261 CVCRQSHESRFCTINEQNNGKHP 329
           C+C++  E   C IN  +   +P
Sbjct: 92  CICKEGWEGALCNINTDDCSPNP 114


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 22/61 (36%), Positives = 26/61 (42%)
 Frame = +3

Query: 369 NKLSLCLFFITQRFLIVHVNYELVFH*KNWYLLPGHGHRFYPLATKAILVYYLIYVPTGI 548
           NKL L L   TQ   ++  N    +   N YLL  H     PL  K  L   L+Y   GI
Sbjct: 6   NKL-LLLDSSTQPNYLILSNKNNTYLVLNKYLLVKHSKPKMPLLPKTPLPLTLLYKLLGI 64

Query: 549 I 551
           I
Sbjct: 65  I 65


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 78  SRELRGSWEGTGDSWS 31
           S +LRG+W G  DS S
Sbjct: 213 SYDLRGNWAGFADSHS 228


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 72  ELRGSWEGTGDSWSG 28
           +LRGSW+G     SG
Sbjct: 208 DLRGSWDGVTGHHSG 222


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 366 LNKLSLCLFFITQRFLIVHVNYELVF 443
           L+   L +FF  +RFL V+V+Y L+F
Sbjct: 161 LSASDLGVFF--KRFLPVYVSYLLIF 184


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 294  CTINEQNNGKHPLGLTMRHTTTL 362
            C +   N+   P   TM+ TTT+
Sbjct: 2199 CILGRDNDKTKPKPTTMKPTTTI 2221


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 388 KHKESLFNYKVVVCRIVSPSGCLPLFCSFMV 296
           K K+        +   V+P  CL  FC+ +V
Sbjct: 43  KSKKEFKTRTYFIYAFVAPVKCLAFFCTALV 73


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 388 KHKESLFNYKVVVCRIVSPSGCLPLFCSFMV 296
           K K+        +   V+P  CL  FC+ +V
Sbjct: 276 KSKKEFKTRTYFIYAFVAPVKCLAFFCTALV 306


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 388 KHKESLFNYKVVVCRIVSPSGCLPLFCSFMV 296
           K K+        +   V+P  CL  FC+ +V
Sbjct: 276 KSKKEFKTRTYFIYAFVAPVKCLAFFCTALV 306


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,446
Number of Sequences: 336
Number of extensions: 3548
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)