Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1053
(634 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 4.8
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 4.8
Z81454-1|CAB03803.1| 320|Caenorhabditis elegans Hypothetical pr... 28 6.4
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 337 SPSGCLPLFCSFMVQNRLSCDWRHT 263
+P GC+P FCS + Q + +R T
Sbjct: 714 NPQGCIPCFCSGVTQQCSASSYRRT 738
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 337 SPSGCLPLFCSFMVQNRLSCDWRHT 263
+P GC+P FCS + Q + +R T
Sbjct: 714 NPQGCIPCFCSGVTQQCSASSYRRT 738
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 337 SPSGCLPLFCSFMVQNRLSCDWRHT 263
+P GC+P FCS + Q + +R T
Sbjct: 714 NPQGCIPCFCSGVTQQCSASSYRRT 738
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 337 SPSGCLPLFCSFMVQNRLSCDWRHT 263
+P GC+P FCS + Q + +R T
Sbjct: 714 NPQGCIPCFCSGVTQQCSASSYRRT 738
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 337 SPSGCLPLFCSFMVQNRLSCDWRHT 263
+P GC+P FCS + Q + +R T
Sbjct: 714 NPQGCIPCFCSGVTQQCSASSYRRT 738
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 337 SPSGCLPLFCSFMVQNRLSCDWRHT 263
+P GC+P FCS + Q + +R T
Sbjct: 714 NPQGCIPCFCSGVTQQCSASSYRRT 738
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 337 SPSGCLPLFCSFMVQNRLSCDWRHT 263
+P GC+P FCS + Q + +R T
Sbjct: 714 NPQGCIPCFCSGVTQQCSASSYRRT 738
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 337 SPSGCLPLFCSFMVQNRLSCDWRHT 263
+P GC+P FCS + Q + +R T
Sbjct: 714 NPQGCIPCFCSGVTQQCSASSYRRT 738
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 337 SPSGCLPLFCSFMVQNRLSCDWRHT 263
+P GC+P FCS + Q + +R T
Sbjct: 714 NPQGCIPCFCSGVTQQCSASSYRRT 738
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 337 SPSGCLPLFCSFMVQNRLSCDWRHT 263
+P GC+P FCS + Q + +R T
Sbjct: 713 NPQGCIPCFCSGVTQQCSASSYRRT 737
>Z81454-1|CAB03803.1| 320|Caenorhabditis elegans Hypothetical
protein B0391.3 protein.
Length = 320
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 486 FYPLATKAILVYYLIYVPTGIIF 554
FY L ++++ +L+Y+P GI+F
Sbjct: 228 FYSLIIQSVIPSFLMYLPAGIVF 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,882,307
Number of Sequences: 27780
Number of extensions: 302494
Number of successful extensions: 729
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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