Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1050
         (593 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022980-5|AAG24192.1|  328|Caenorhabditis elegans Serpentine re...    31   0.47 
Z72517-6|CAA96696.3|  261|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81137-3|CAB03471.1|  338|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AF022980-11|AAG24189.1|  330|Caenorhabditis elegans Serpentine r...    28   5.8  
U53344-6|AAK77632.2|  702|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AL031632-3|CAA21006.1|  283|Caenorhabditis elegans Hypothetical ...    27   7.6  

>AF022980-5|AAG24192.1|  328|Caenorhabditis elegans Serpentine
           receptor, class j protein45 protein.
          Length = 328

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +3

Query: 99  NYNYMLLKIFLNISL*KYRYSFFLNYILHYSCSQNAQL*FLWLIIICPIVQQS 257
           N+ Y ++ + + + +  YRYSFF+ ++ H    + + L F  L+  C IV  S
Sbjct: 51  NFIYSVVNVSVPLDIHNYRYSFFI-FVRHGWFMERSDLNFHILVARCSIVASS 102


>Z72517-6|CAA96696.3|  261|Caenorhabditis elegans Hypothetical
           protein T28F4.6 protein.
          Length = 261

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 320 CNYVNLKINFINSLVIVFDRIGLLNNRTNNN 228
           C+   L  ++++S  I+FDRI LL   TN+N
Sbjct: 161 CHNKELVTSWLSSNTILFDRIALLLESTNDN 191


>Z81137-3|CAB03471.1|  338|Caenorhabditis elegans Hypothetical
           protein W02D9.4 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 198 DYNYSVEYNLKKNCTYIFTMRYLKKSLVACSYS*VC 91
           D  Y  +  L KN T I  ++Y KK+   C Y   C
Sbjct: 26  DSLYETKPELYKNLTRIHRLKYFKKNGTICGYPFTC 61


>AF022980-11|AAG24189.1|  330|Caenorhabditis elegans Serpentine
           receptor, class j protein49 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +3

Query: 99  NYNYMLLKIFLNISL*KYRYSFFLNYILHYSCSQNAQL*FLWLIIICPIVQQS 257
           N  Y ++   + I +  YRY FFL ++ +    Q+ QL F  L+  C ++  S
Sbjct: 51  NMIYSVMNFLIQIDIHSYRYCFFL-FLKNNWFPQSPQLNFHLLLARCSMLAAS 102


>U53344-6|AAK77632.2|  702|Caenorhabditis elegans Hypothetical
           protein T07H6.1a protein.
          Length = 702

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 320 CNYVNLKINFINSLVIVFDRIGLLNNRTNNNKP 222
           CNY N+KIN +   +   D++  L    N + P
Sbjct: 309 CNYQNVKINCLTDDMTQMDKMNCLRKELNFSSP 341


>AL031632-3|CAA21006.1|  283|Caenorhabditis elegans Hypothetical
           protein Y32B12B.3 protein.
          Length = 283

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 15/74 (20%), Positives = 34/74 (45%)
 Frame = +3

Query: 153 RYSFFLNYILHYSCSQNAQL*FLWLIIICPIVQQSDPIEYNYERIYKIYF*VDVITFLMR 332
           ++ +FL+        +NA    LW II   IV+    +  N +R+  +YF +    +  +
Sbjct: 63  KFYYFLHLFTEKLVIRNATFFMLWPIIPLGIVRSILMLSINIDRLGALYFPIFYFKYHRK 122

Query: 333 ISIFLLLMFFKCFV 374
             I ++++    ++
Sbjct: 123 FPISIIVILTLTYI 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,450,201
Number of Sequences: 27780
Number of extensions: 217804
Number of successful extensions: 557
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)