Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1048
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.70 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   3.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   3.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   6.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.7  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 90  LTFNFITITYNHWMNIECLNLPV 158
           LT+N     Y +W+N+ CLNL +
Sbjct: 46  LTYNNTNRKY-YWLNVCCLNLSI 67


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 515 ERKQENQHQNHCCIKLR*TRTALQLNSYCC 604
           E++++  +QN C +K    R   + N+Y C
Sbjct: 482 EKQRQQCNQNKCPVKRGNGRCDEECNTYAC 511


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -1

Query: 345 YFAIRLYQNHGAADSIGNKTYDIATLITTH 256
           +F    Y N+ A   +  + ++IA    TH
Sbjct: 223 FFVSHKYTNYSAVQDLHRRGHEIAVFSLTH 252



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 481 QSTKLLRNSFSREKTGKSAPESLLYKA 561
           Q  +LLR++F+R      AP  L + A
Sbjct: 392 QFARLLRHNFNRHLNSNRAPLGLHFHA 418


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -1

Query: 345 YFAIRLYQNHGAADSIGNKTYDIATLITTH 256
           +F    Y N+ A   +  + ++IA    TH
Sbjct: 230 FFVSHKYTNYSAVQDLHRRGHEIAVFSLTH 259



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 481 QSTKLLRNSFSREKTGKSAPESLLYKA 561
           Q  +LLR++F+R      AP  L + A
Sbjct: 399 QFARLLRHNFNRHLNSNRAPLGLHFHA 425


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 345 YFAIRLYQNHGAADSIGNKTYDIATLITTH 256
           +F    Y N+ A   +  K ++IA    TH
Sbjct: 231 FFVSHKYTNYSAVQEMHRKGHEIAVHSITH 260


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 410 VCTLQPSELVQHIPHNGNDCTIILPSASIKIT 315
           +CT+  +  V+HI    N C+ I      K T
Sbjct: 316 ICTIMSAAAVEHILSIVNTCSQIPSEVEDKYT 347


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 611 SANSSSYLIVMQFEFTGALYNND 543
           S+NSS+Y     ++F    + ND
Sbjct: 564 SSNSSNYFANKTYDFHNMSFEND 586


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,573
Number of Sequences: 336
Number of extensions: 2584
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)