Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1048
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016421-7|AAO12430.1|  413|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z83129-6|CAB63324.1|  101|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>AF016421-7|AAO12430.1|  413|Caenorhabditis elegans Hypothetical
           protein F44E7.5a protein.
          Length = 413

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +1

Query: 481 QSTKLLRNSFSREKTGKSAPESLLYKAPVNSNCITI 588
           Q TKLL     +   GK+  +++L++ P N+N +++
Sbjct: 350 QVTKLLEREDFKSLYGKTLADAVLFERPFNANSVSV 385


>Z83129-6|CAB63324.1|  101|Caenorhabditis elegans Hypothetical
           protein W06G6.10 protein.
          Length = 101

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 464 IITVTISRLSYCEIHSQERKQENQHQNHCC 553
           I  + +  +S+ +I SQ  KQ+    N+CC
Sbjct: 43  IYVIAVQPVSFSDIESQAVKQDASSPNNCC 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,520,809
Number of Sequences: 27780
Number of extensions: 230990
Number of successful extensions: 577
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)