Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1047
(623 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical prot... 44 4e-06
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 28 0.28
U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein. 25 2.6
AY334000-1|AAR01125.1| 268|Anopheles gambiae FBN23 protein. 23 7.9
AY333999-1|AAR01124.1| 268|Anopheles gambiae FBN23 protein. 23 7.9
AY333998-1|AAR01123.1| 268|Anopheles gambiae FBN23 protein. 23 7.9
AY333997-1|AAR01122.1| 268|Anopheles gambiae FBN23 protein. 23 7.9
>AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical protein
protein.
Length = 278
Score = 44.0 bits (99), Expect = 4e-06
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
P PYP+ V+ P+K+ + + P I KPVPY VEKP
Sbjct: 195 PQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKP 231
Score = 37.1 bits (82), Expect = 5e-04
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2
Query: 191 IPYPVEKKIPYPVKVHVPQPYPL 259
+P+PV +P+ VKV++PQPYPL
Sbjct: 178 VPHPVPIAVPHYVKVYIPQPYPL 200
Score = 33.5 bits (73), Expect = 0.006
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +3
Query: 510 PAPYPVYKEV----QVPVKVHVDRPYPVHIPKPVPYPVEK 617
P P+YK + + PV V++PYP+ + KP P V K
Sbjct: 207 PIKIPIYKVIPKVIEKPVPYTVEKPYPIEVEKPFPVEVLK 246
Score = 33.1 bits (72), Expect = 0.007
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYP--VHIPKPVPYPVEK 617
P P+PV V VKV++ +PYP V++ +P+ P+ K
Sbjct: 177 PVPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKIPIYK 214
Score = 33.1 bits (72), Expect = 0.007
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 516 PYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPV 611
PYP+ EV+ P V V + + V +PKP P PV
Sbjct: 231 PYPI--EVEKPFPVEVLKKFEVPVPKPYPVPV 260
Score = 28.3 bits (60), Expect = 0.21
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 516 PYPVYKEVQVPVK--VHVDRPYPVHIPKPVPYPVE 614
P PV+++V VPV V + P+ V + P PYP++
Sbjct: 167 PVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQ 201
Score = 25.0 bits (52), Expect = 2.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 172 LPRRKAHPLPGRKENPLPRESARSPTLPVVKHVPYPVKEIVKVPV 306
+P+ P+P E P P E + + V+K PV + VPV
Sbjct: 216 IPKVIEKPVPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVPV 260
Score = 23.4 bits (48), Expect = 6.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 194 PYPVEKKIPYPVKVHVPQPYPLSNMSLTQLKRLSRYQFTYRN 319
P+PVE + V V P P P +T K + + + T+RN
Sbjct: 239 PFPVEVLKKFEVPVPKPYPVP-----VTVYKHIMQNEKTHRN 275
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 27.9 bits (59), Expect = 0.28
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 546 PVKVHVDRPYPVHIPKPVPYPVEKP 620
PV + V PYP+ IP P+P PV P
Sbjct: 625 PVTILV--PYPIIIPLPLPIPVPIP 647
Score = 24.2 bits (50), Expect = 3.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 200 PVEKKIPYPVKVHVPQPYPL 259
PV +PYP+ + +P P P+
Sbjct: 625 PVTILVPYPIIIPLPLPIPV 644
Score = 23.8 bits (49), Expect = 4.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 191 IPYPVEKKIPYPVKVHVP 244
+PYP+ +P P+ V +P
Sbjct: 630 VPYPIIIPLPLPIPVPIP 647
>U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein.
Length = 280
Score = 24.6 bits (51), Expect = 2.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 396 HIYLDGDGSVDWDMYWVRHLLFDWV 322
+I+L DGS+ W VR LLF+ V
Sbjct: 78 NIFLKTDGSLLWKNKPVRELLFEGV 102
>AY334000-1|AAR01125.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 7.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 453 GHVHFDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWV 346
G + F + N + R W Y +G GSVD + +W+
Sbjct: 174 GWLVFQYRFNGSVDFNRDWVAYRNGFGSVDGE-FWL 208
>AY333999-1|AAR01124.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 7.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 453 GHVHFDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWV 346
G + F + N + R W Y +G GSVD + +W+
Sbjct: 174 GWLVFQYRFNGSVDFNRDWVAYRNGFGSVDGE-FWL 208
>AY333998-1|AAR01123.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 7.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 453 GHVHFDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWV 346
G + F + N + R W Y +G GSVD + +W+
Sbjct: 174 GWLVFQYRFNGSVDFNRDWVAYRNGFGSVDGE-FWL 208
>AY333997-1|AAR01122.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 7.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 453 GHVHFDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWV 346
G + F + N + R W Y +G GSVD + +W+
Sbjct: 174 GWLVFQYRFNGSVDFNRDWVAYRNGFGSVDGE-FWL 208
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,717
Number of Sequences: 2352
Number of extensions: 10891
Number of successful extensions: 104
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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