Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1047
(623 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 40 0.001
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 37 0.010
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 33 0.22
U47144-1|AAB52616.2| 448|Caenorhabditis elegans Hypothetical pr... 31 0.51
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 0.88
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 28 4.7
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF125463-1|AAD12861.2| 263|Caenorhabditis elegans Hypothetical ... 28 4.7
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 4.7
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 28 6.2
Z73098-10|CAA97336.2| 391|Caenorhabditis elegans Hypothetical p... 27 8.2
Z71185-5|CAA94911.1| 1078|Caenorhabditis elegans Hypothetical pr... 27 8.2
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 27 8.2
AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical ... 27 8.2
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +3
Query: 513 APYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
AP PV + V VPV V V P V +P PVP PV +P
Sbjct: 148 APQPVIQHVPVPVPVQVPVPIRVPVPVPVPTPVYQP 183
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 191 IPYPVEKKIPYPVKVHVPQPYP 256
+P PV ++P P++V VP P P
Sbjct: 156 VPVPVPVQVPVPIRVPVPVPVP 177
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYP 608
P P PV QVPV + V P PV +P PV P
Sbjct: 157 PVPVPV----QVPVPIRV--PVPVPVPTPVYQP 183
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 37.1 bits (82), Expect = 0.010
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPV 611
PAP PV V PV V + P P+ +P PVP PV
Sbjct: 10 PAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
Score = 35.9 bits (79), Expect = 0.024
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
P P P+ VPV V +P PV +P P+P P+ P
Sbjct: 2 PPPIPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMP 38
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
P P PV VP V V P P+ +P P+P PV P
Sbjct: 8 PIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVP 44
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
P P P+ V VP V P P+ +P P+P P+ P
Sbjct: 4 PIPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVP 40
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
P P P V PV V P P+ +P P+P PV P
Sbjct: 6 PIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVP 42
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 543 VPVKVHVDRPYPVHIPKPVPYPVEKP 620
+P + + P PV +P PVP PV P
Sbjct: 1 MPPPIPIPIPAPVPVPAPVPQPVPVP 26
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 194 PYPVEKKIPYPVKVHVPQPYPL 259
P PV +P PV V +P P P+
Sbjct: 12 PVPVPAPVPQPVPVPMPMPMPM 33
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
P P P +K P + +P P H PKP P P+ P+
Sbjct: 48 PKPMPKHKPKPFPKPMLFPKPMPKHKPKPFPKPMLFPK 85
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 486 PRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
P + P P P +K P + +P P+ P P P P+ KP+
Sbjct: 210 PMPFPKPMPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPK 255
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 483 LPRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
+P+ + +P P K + +P + +P P PKP P P KP+
Sbjct: 221 MPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPKPKPKPMPKPKPK 267
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 486 PRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
P+ + P P P+ K P + P P+ IPKP+P+P P+
Sbjct: 174 PKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPK 219
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 175 PRRKAHPLPGRKENPLPRESARSPTLPVVKHVPYPVKEIVKVPVH 309
P+ K P+P K P P+ +P+ K +P+P +P H
Sbjct: 180 PKPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPMPKH 224
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
P P P K + P+ H +P+P + P P P+ KP
Sbjct: 208 PKPMPFPKPMPKPMPKHKPKPFPKPMLFPKPMPIPKP 244
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
P P P +K P + +P P+ P P P P+ KP
Sbjct: 184 PKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKP 220
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 486 PRKGSRTWPAPYPVYKEVQVPVKVHVDRPY--PVHIPKPVPYPVEKPR 623
P+ + P P+P P+ H +P+ P+ PKP+P+P P+
Sbjct: 48 PKPMPKHKPKPFPKPMLFPKPMPKHKPKPFPKPMLFPKPMPFPKPMPK 95
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 483 LPRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
+P+ ++ P P P+ +P +P P H PKP P P+ P+
Sbjct: 21 MPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPK 67
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 483 LPRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
+P+ ++ P P P+ P+ H +P+P + P P P+ KP
Sbjct: 93 MPKSKPKSEPFPNPMPFPKPKPMPKHKPKPFPKPMLFPKPMPIPKP 138
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 483 LPRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
+P+ ++ P P P+ +P +P P H PKP P P+ P+
Sbjct: 157 MPKSKPKSEPFPNPMPFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPK 203
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 507 WPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
+P P P K P+ H +P+P + P P P+ KP
Sbjct: 173 FPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPIPKP 210
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 507 WPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
+P P P+ K + P + +P P H PKP P P+ P+
Sbjct: 201 FPKPMPIPKPMPFPKPM--PKPMPKHKPKPFPKPMLFPK 237
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 486 PRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEK 617
P+ S +P P P K P + P P+ PKP P P+ K
Sbjct: 10 PKPKSEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPK 53
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
P P P+ +P+ + P P+ PKP+P+P P+
Sbjct: 122 PFPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPK 159
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 483 LPRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
+P+ + P P+P P+ + P+P +PKP P P P+
Sbjct: 217 MPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPKPKPKPMPK 263
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 507 WPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
+P P P K P+ H +P+P + P P P KP+
Sbjct: 37 FPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPKHKPK 75
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +1
Query: 172 LPRRKAHPLPGRKENPLPRESARSPTLPVVKHVPYPVKEIVKVPV 306
+P K P+P K P P+ +P+ K +P+P + P+
Sbjct: 107 MPFPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMLFPKPM 151
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 507 WPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYP 608
+P P P+ K P + P P+ IPKP+P+P
Sbjct: 109 FPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFP 142
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 483 LPRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
+P+ + +P P K + +P + +P P +PK P P KP
Sbjct: 187 MPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPMPKHKPKPFPKP 232
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 486 PRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
P+ + P P+P K + P + + +P P P P P P KP+
Sbjct: 184 PKPMPKHKPKPFP--KPMLFPKPMPIPKPMPFPKPMPKPMPKHKPK 227
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 507 WPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
+P P P+ K + P + +P P +PKP P KP+
Sbjct: 235 FPKPMPIPKPMPFPKPMPKPKPKPKPMPKPKPKLKLKPK 273
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +3
Query: 483 LPRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
+P+ + +P P K + P + +P P P+P+P KP
Sbjct: 69 MPKHKPKPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPKP 114
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
P P P +K P + +P P+ P P P P+ P+
Sbjct: 112 PKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMLFPK 149
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +1
Query: 175 PRRKAHPLPGRKENPLPRESARSPTLPVVKHVPYP 279
P+ P+P K P P+ +P+ K +P+P
Sbjct: 214 PKPMPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFP 248
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 483 LPRKGSRTWPAPYPVYKEVQVPVKVHVDRP--YPVHIPKPVPYPVEKPR 623
+P+ + +P P K + +P + +P +P +P P P P KP+
Sbjct: 115 MPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPK 163
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +1
Query: 175 PRRKAHPLPGRKENPLPRESARSPTLPVVKHVPYPVKEIVKVPV 306
P+ K P+P K P P+ +P K P+P + P+
Sbjct: 44 PKPKPKPMPKHKPKPFPKPMLFPKPMPKHKPKPFPKPMLFPKPM 87
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
P P P+ K P + +P PKP+P+P KP+
Sbjct: 246 PFPKPMPKPKPKPKPMPKPKPKLKLKPKPMPFPKPKPK 283
>U47144-1|AAB52616.2| 448|Caenorhabditis elegans Hypothetical
protein ZC53.1 protein.
Length = 448
Score = 31.5 bits (68), Expect = 0.51
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = +2
Query: 224 PVKVHVPQPYPLSNMSLTQLKRLSRYQFTYRNPTQSKRRCLTQYM-----SQSTDPS 379
P K VPQP PL+ +S +++R + QF +PT S R L SQ TDPS
Sbjct: 67 PEKASVPQPLPLTRVS-DRVRRRT-VQFADVSPTASSRNTLNDGFYDPRPSQLTDPS 121
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.7 bits (66), Expect = 0.88
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = +3
Query: 510 PAPYPV---YKEVQVPVKVHVDRPYPVH-IPKPVPYPVEKPR 623
PAP P Y + VPV PYP H +P P P P P+
Sbjct: 78 PAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQ 119
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVH-IPKPVP 602
PAPYP + VP PYP H +P P P
Sbjct: 54 PAPYP---QQAVPAPAPPPAPYPQHAVPAPAP 82
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 480 TLPRKGSR---TWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPV 611
++P++ +R T+ P P QVP KV V P P +P+PVP PV
Sbjct: 82 SVPKRSNRKKLTYKQP-PRNSTPQVP-KVAVTLPVPEPVPEPVPEPV 126
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 480 TLPRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
T K SR+ P PV ++ +++P P P+ P PV+ P
Sbjct: 37 TRSTKSSRSSPKTVPVTEQPAAAPPQQLEQPTPAPAPESAPAPVQCP 83
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 510 PAPYPVYKEVQ-VPVKVHVDRPYPVHIPKPVPYPVE 614
P P PV K + VP V P P + P P PVE
Sbjct: 202 PMPVPVEKAPEPVPAPVEQIAPPPAPVQDPAPAPVE 237
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 540 QVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
+ P K D+P P +PK P P E P+
Sbjct: 316 KAPSKKPTDKPKPKDLPKEEPKPAEPPK 343
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
P P + P K D+P +PK P P E P+
Sbjct: 224 PKPKDPKLAKKAPAKKPTDKPKSKDVPKEAPKPAEPPK 261
>AF125463-1|AAD12861.2| 263|Caenorhabditis elegans Hypothetical
protein Y49F6C.6 protein.
Length = 263
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 239 VPQPYPLSNMSLTQL-KRLSRYQFTYRNPTQSKRRCLTQYM-SQSTDPSP 382
VP+PYP +N L K +++ Y NPT L QY+ S +T P P
Sbjct: 53 VPRPYPTNNSKPISLQKTKTQFFLNYSNPT-----VLLQYLYSTTTVPRP 97
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 510 PAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKP 620
PAP PV + P V+ Y + P P P P +P
Sbjct: 1714 PAPAPVTQPAVQPAPGPVEHRYEIPAPGPAPGPALEP 1750
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +3
Query: 486 PRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
P+ + P P P K P +P P PKP P P KP+
Sbjct: 179 PKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPK 224
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +3
Query: 486 PRKGSRTWPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
P+ + P P P K P +P P PKP P P KP+
Sbjct: 185 PKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPK 230
>Z73098-10|CAA97336.2| 391|Caenorhabditis elegans Hypothetical
protein T21C9.9 protein.
Length = 391
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 516 PYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPR 623
P P Y + Q P ++ RP P+P P P + PR
Sbjct: 94 PNPRYIQPQAPRPQYISRP----APRPAPAPYQPPR 125
>Z71185-5|CAA94911.1| 1078|Caenorhabditis elegans Hypothetical
protein C35A5.8 protein.
Length = 1078
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 242 PQPYPLSNMSLTQL-KRLSRYQFTYRNPTQSK 334
PQ P SL QL RL++ ++TY+NPT+++
Sbjct: 94 PQFPPYLVTSLCQLFARLTKQEWTYQNPTENQ 125
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 27.5 bits (58), Expect = 8.2
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +3
Query: 537 VQVPVKVHVDRPYPVHIPKPVPYPV 611
+Q+ ++H++ +P +P P+P PV
Sbjct: 204 LQISPQMHINPNFPTLVPLPIPQPV 228
>AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical
protein C55B7.5 protein.
Length = 446
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 239 VPQPYPLSNMSLTQLKRLSRYQFTYRNPTQSKRR 340
+P+P+ +SN L L +L + ++PT K R
Sbjct: 202 IPKPFEVSNEDLQDLGKLEEVEEVEQDPTDKKLR 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,044,939
Number of Sequences: 27780
Number of extensions: 264460
Number of successful extensions: 1477
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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