Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1046
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT028801-1|ABI34182.1|  286|Drosophila melanogaster LP21747p pro...    30   3.2  
BT004476-1|AAO42640.1|  286|Drosophila melanogaster LP07342p pro...    30   3.2  
AE014297-4048|AAF56656.1|  286|Drosophila melanogaster CG5812-PA...    30   3.2  

>BT028801-1|ABI34182.1|  286|Drosophila melanogaster LP21747p
           protein.
          Length = 286

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
 Frame = +1

Query: 463 SMVSKHFKVNKYPQ-----RVRPQLARGQSQLHKKQVFIK 567
           ++V KH  V+  P      R RP L  GQSQ H K +FIK
Sbjct: 129 TLVQKHIYVHVPPPEQEEVRQRPNLPIGQSQKHYKIIFIK 168


>BT004476-1|AAO42640.1|  286|Drosophila melanogaster LP07342p
           protein.
          Length = 286

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
 Frame = +1

Query: 463 SMVSKHFKVNKYPQ-----RVRPQLARGQSQLHKKQVFIK 567
           ++V KH  V+  P      R RP L  GQSQ H K +FIK
Sbjct: 129 TLVQKHIYVHVPPPEQEEVRQRPNLPIGQSQKHYKIIFIK 168


>AE014297-4048|AAF56656.1|  286|Drosophila melanogaster CG5812-PA
           protein.
          Length = 286

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
 Frame = +1

Query: 463 SMVSKHFKVNKYPQ-----RVRPQLARGQSQLHKKQVFIK 567
           ++V KH  V+  P      R RP L  GQSQ H K +FIK
Sbjct: 129 TLVQKHIYVHVPPPEQEEVRQRPNLPIGQSQKHYKIIFIK 168


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,213,949
Number of Sequences: 53049
Number of extensions: 409563
Number of successful extensions: 789
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)