Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1042
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   2.2  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    25   2.2  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    24   5.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.6  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   6.6  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   6.6  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   8.8  

>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 315  VNGFKYNQVDDHVVCEYCEAE 377
            +N  K  +VD   VCE CE E
Sbjct: 1312 LNAIKVYEVDKQNVCEICEEE 1332


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = -1

Query: 497 VDGDVVAKRFMLSNLVGIRAIRR*GYVCIFNTLVFGPIF---YFCFTILAHNVIV 342
           V  D   K+F++ N+V   A+R      ++++ V   ++   ++C +   H+ +V
Sbjct: 29  VPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYCVSCAIHSKVV 83


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 134 EHVWVVLV*RHVYMAQFSF 78
           EH++V L  +HV+ A+F F
Sbjct: 131 EHIFVALRDQHVFRAKFRF 149


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 450  NKIAEHESFGDNITINAVLVKKAD 521
            N ++  +  GDN+  NA+L  K++
Sbjct: 3375 NVVSAFDLLGDNVKFNAILQSKSN 3398


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 622 GSGTFLHGSRRT 657
           G G FLHGS RT
Sbjct: 954 GGGGFLHGSNRT 965


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 622 GSGTFLHGSRRT 657
           G G FLHGS RT
Sbjct: 952 GGGGFLHGSNRT 963


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 17/75 (22%), Positives = 29/75 (38%)
 Frame = -2

Query: 514 FFTSTALMVMLSPNDSCSAILLAYAQYGDKVTCAYSIHSSSDQFFISASQYXXXXXXXX* 335
           F+T   ++  +  +  C  +    A+ G+KVT   SI  S   F +  S+          
Sbjct: 234 FYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLP 293

Query: 334 LYLNPLTIKLLINAV 290
           L    L    ++N V
Sbjct: 294 LIAKYLLFTFIMNTV 308


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,421
Number of Sequences: 2352
Number of extensions: 13639
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)